RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 MVPQ14764 893 aaKnown RBP21.78■■□□□ 1.08
DDR1-270ENST00000513043 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
DDR1-270ENST00000513043 MINPP1Q9UNW1 487 aa21.78■■□□□ 1.08
DDR1-270ENST00000513043 C6orf229H3BNL8 230 aa21.77■■□□□ 1.08
DDR1-270ENST00000513043 IARSP41252 1262 aaKnown RBP21.77■■□□□ 1.08
DDR1-270ENST00000513043 GPR101Q96P66 508 aaPredicted RBP21.77■■□□□ 1.08
DDR1-270ENST00000513043 CCDC88AQ3V6T2 1871 aa21.77■■□□□ 1.08
DDR1-270ENST00000513043 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
DDR1-270ENST00000513043 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
DDR1-270ENST00000513043 PUS3Q9BZE2 481 aaKnown RBP21.76■■□□□ 1.07
DDR1-270ENST00000513043 CNNM1Q9NRU3 951 aa21.76■■□□□ 1.07
DDR1-270ENST00000513043 POLLQ9UGP5 575 aa21.76■■□□□ 1.07
DDR1-270ENST00000513043 DUOX1Q9NRD9 1551 aa21.75■■□□□ 1.07
DDR1-270ENST00000513043 WTIPA6NIX2 430 aaPredicted RBP21.75■■□□□ 1.07
DDR1-270ENST00000513043 PPIP5K2O43314 1243 aa21.75■■□□□ 1.07
DDR1-270ENST00000513043 UFL1O94874 794 aa21.75■■□□□ 1.07
DDR1-270ENST00000513043 AOC3Q16853 763 aa21.75■■□□□ 1.07
DDR1-270ENST00000513043 SUPT20HQ8NEM7 779 aa21.75■■□□□ 1.07
DDR1-270ENST00000513043 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
DDR1-270ENST00000513043 RTFDC1Q9BY42 306 aaPredicted RBP21.75■■□□□ 1.07
DDR1-270ENST00000513043 CHRNDQ07001 517 aa21.74■■□□□ 1.07
DDR1-270ENST00000513043 LARGE2Q8N3Y3 721 aa21.74■■□□□ 1.07
DDR1-270ENST00000513043 TBC1D16Q8TBP0 767 aa21.74■■□□□ 1.07
DDR1-270ENST00000513043 GGA1Q9UJY5 639 aa21.74■■□□□ 1.07
DDR1-270ENST00000513043 XDHP47989 1333 aa21.74■■□□□ 1.07
DDR1-270ENST00000513043 RIMBP2O15034 1052 aa21.73■■□□□ 1.07
DDR1-270ENST00000513043 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
DDR1-270ENST00000513043 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
DDR1-270ENST00000513043 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
DDR1-270ENST00000513043 DDX19BQ9UMR2 479 aa21.73■■□□□ 1.07
DDR1-270ENST00000513043 LTBP1Q14766 1721 aa21.72■■□□□ 1.07
DDR1-270ENST00000513043 TAF5LO75529 589 aa21.72■■□□□ 1.07
DDR1-270ENST00000513043 LRRC24Q50LG9 513 aa21.72■■□□□ 1.07
DDR1-270ENST00000513043 ZNF526Q8TF50 670 aaPredicted RBP21.72■■□□□ 1.07
DDR1-270ENST00000513043 SIL1Q9H173 461 aa21.72■■□□□ 1.07
DDR1-270ENST00000513043 PA2G4Q9UQ80 394 aaKnown RBP21.72■■□□□ 1.07
DDR1-270ENST00000513043 SNAP23O00161 211 aa21.71■■□□□ 1.07
DDR1-270ENST00000513043 PTPN12Q05209 780 aaKnown RBP21.71■■□□□ 1.07
DDR1-270ENST00000513043 WASHC4Q2M389 1173 aa21.71■■□□□ 1.07
DDR1-270ENST00000513043 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
DDR1-270ENST00000513043 COL4A5P29400 1685 aa21.71■■□□□ 1.07
DDR1-270ENST00000513043 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
DDR1-270ENST00000513043 PNMA6EA0A0J9YXQ4 647 aa21.7■■□□□ 1.06
DDR1-270ENST00000513043 ATP2B4P23634 1241 aa21.7■■□□□ 1.06
DDR1-270ENST00000513043 KIAA2012Q0VF49 1180 aa21.7■■□□□ 1.06
DDR1-270ENST00000513043 JDP2Q8WYK2 163 aa21.7■■□□□ 1.06
DDR1-270ENST00000513043 EYA3Q99504 573 aa21.7■■□□□ 1.06
DDR1-270ENST00000513043 KCNJ4P48050 445 aa21.69■■□□□ 1.06
DDR1-270ENST00000513043 MTX1Q13505 466 aa21.69■■□□□ 1.06
DDR1-270ENST00000513043 NIM1KQ8IY84 436 aa21.69■■□□□ 1.06
DDR1-270ENST00000513043 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
DDR1-270ENST00000513043 SUPT16HQ9Y5B9 1047 aaKnown RBP21.69■■□□□ 1.06
DDR1-270ENST00000513043 DOK7Q18PE1 504 aa21.68■■□□□ 1.06
DDR1-270ENST00000513043 METTL24Q5JXM2 366 aa21.68■■□□□ 1.06
DDR1-270ENST00000513043 ZC3H12CQ9C0D7 883 aaKnown RBP21.68■■□□□ 1.06
DDR1-270ENST00000513043 ZBTB40Q9NUA8 1239 aa21.68■■□□□ 1.06
DDR1-270ENST00000513043 DICER1Q9UPY3 1922 aaKnown RBP21.68■■□□□ 1.06
DDR1-270ENST00000513043 ZNF804BA4D1E1 1349 aa21.67■■□□□ 1.06
DDR1-270ENST00000513043 EYA2O00167 538 aa21.67■■□□□ 1.06
DDR1-270ENST00000513043 KLRK1P26718 216 aa21.67■■□□□ 1.06
DDR1-270ENST00000513043 DBNDD1Q9H9R9 158 aa21.67■■□□□ 1.06
DDR1-270ENST00000513043 LEMD3Q9Y2U8 911 aa21.67■■□□□ 1.06
DDR1-270ENST00000513043 ZNF541Q9H0D2 1346 aa21.66■■□□□ 1.06
DDR1-270ENST00000513043 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
DDR1-270ENST00000513043 VPS33BQ9H267 617 aa21.66■■□□□ 1.06
DDR1-270ENST00000513043 MROH5Q6ZUA9 1318 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
DDR1-270ENST00000513043 G3V3G9 751 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 DCAF8Q5TAQ9 597 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 ATG9AQ7Z3C6 839 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 CRBNQ96SW2 442 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
DDR1-270ENST00000513043 COPRSQ9NQ92 184 aa21.65■■□□□ 1.06
DDR1-270ENST00000513043 A0A1B0GUL6 1792 aa21.64■■□□□ 1.06
DDR1-270ENST00000513043 FZD9O00144 591 aa21.64■■□□□ 1.05
DDR1-270ENST00000513043 C1QTNF8P60827 252 aa21.64■■□□□ 1.05
DDR1-270ENST00000513043 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.05
DDR1-270ENST00000513043 ECE2O60344 883 aa21.63■■□□□ 1.05
DDR1-270ENST00000513043 EIF6P56537 245 aaKnown RBP21.63■■□□□ 1.05
DDR1-270ENST00000513043 POLA2Q14181 598 aa21.63■■□□□ 1.05
DDR1-270ENST00000513043 SSH3Q8TE77 659 aa21.63■■□□□ 1.05
DDR1-270ENST00000513043 ZNRF3Q9ULT6 936 aa21.63■■□□□ 1.05
DDR1-270ENST00000513043 MED23Q9ULK4 1368 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 GLTPD2A6NH11 291 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 YDJCA8MPS7 323 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 CIAO1O76071 339 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 DDNO94850 711 aaPredicted RBP21.62■■□□□ 1.05
DDR1-270ENST00000513043 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 VGLL2Q8N8G2 317 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 GJA3Q9Y6H8 435 aa21.62■■□□□ 1.05
DDR1-270ENST00000513043 RAD17O75943 681 aa21.61■■□□□ 1.05
DDR1-270ENST00000513043 PDE8BO95263 885 aa21.61■■□□□ 1.05
DDR1-270ENST00000513043 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
DDR1-270ENST00000513043 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
DDR1-270ENST00000513043 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
DDR1-270ENST00000513043 KCNQ5Q9NR82 932 aa21.6■■□□□ 1.05
DDR1-270ENST00000513043 CEP126Q9P2H0 1117 aa21.6■■□□□ 1.05
DDR1-270ENST00000513043 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
DDR1-270ENST00000513043 SURF6O75683 361 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms