RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
CDK7-208ENST00000512687 DNAAF4Q8WXU2 420 aa15.39■□□□□ 0.05
CDK7-208ENST00000512687 F6X3S4 739 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 H7C1W4 665 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 RAD17O75943 681 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
CDK7-208ENST00000512687 LMOD1P29536 600 aaPredicted RBP15.38■□□□□ 0.05
CDK7-208ENST00000512687 GMPSP49915 693 aaPredicted RBP15.38■□□□□ 0.05
CDK7-208ENST00000512687 CASP7P55210 303 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 GCKRQ14397 625 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
CDK7-208ENST00000512687 CIAPIN1Q6FI81 312 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
CDK7-208ENST00000512687 TTLL11Q8NHH1 800 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 TBC1D16Q8TBP0 767 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 MYH16Q9H6N6 1097 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 DBNDD1Q9H9R9 158 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
CDK7-208ENST00000512687 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 SHTN1A0MZ66 631 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 GREM2Q9H772 168 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
CDK7-208ENST00000512687 KCNQ5Q9NR82 932 aa15.36■□□□□ 0.05
CDK7-208ENST00000512687 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
CDK7-208ENST00000512687 WTIPA6NIX2 430 aaPredicted RBP15.35■□□□□ 0.05
CDK7-208ENST00000512687 ECE2O60344 883 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 UFL1O94874 794 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 FMR1Q06787 632 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDK7-208ENST00000512687 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
CDK7-208ENST00000512687 PSMD14O00487 310 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 BEND3Q5T5X7 828 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 USP50Q70EL3 339 aaPredicted RBP15.34■□□□□ 0.05
CDK7-208ENST00000512687 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 EYA3Q99504 573 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 ADARB2Q9NS39 739 aaKnown RBP15.34■□□□□ 0.05
CDK7-208ENST00000512687 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
CDK7-208ENST00000512687 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
CDK7-208ENST00000512687 TNIP1Q15025 636 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 FAM161AQ3B820 660 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.04
CDK7-208ENST00000512687 BCL2L13Q9BXK5 485 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 ANKIB1Q9P2G1 1089 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 XDHP47989 1333 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
CDK7-208ENST00000512687 TMEM88BA6NKF7 163 aa15.32■□□□□ 0.04
CDK7-208ENST00000512687 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
CDK7-208ENST00000512687 TRAF5O00463 557 aa15.31■□□□□ 0.04
CDK7-208ENST00000512687 CSF1RP07333 972 aa15.31■□□□□ 0.04
CDK7-208ENST00000512687 ITGA6P23229 1130 aa15.31■□□□□ 0.04
CDK7-208ENST00000512687 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
CDK7-208ENST00000512687 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
CDK7-208ENST00000512687 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
CDK7-208ENST00000512687 MINPP1Q9UNW1 487 aa15.31■□□□□ 0.04
CDK7-208ENST00000512687 EGFRP00533 1210 aa15.3■□□□□ 0.04
CDK7-208ENST00000512687 FOXO4P98177 505 aa15.3■□□□□ 0.04
CDK7-208ENST00000512687 SLFN5Q08AF3 891 aa15.3■□□□□ 0.04
CDK7-208ENST00000512687 ECM29Q5VYK3 1845 aa15.3■□□□□ 0.04
CDK7-208ENST00000512687 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
CDK7-208ENST00000512687 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
CDK7-208ENST00000512687 ZNF609O15014 1411 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 MED23Q9ULK4 1368 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 E9PSI1 815 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 ATP2B4P23634 1241 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 EPHA10Q5JZY3 1008 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
CDK7-208ENST00000512687 DPF2Q92785 391 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
CDK7-208ENST00000512687 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
CDK7-208ENST00000512687 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
CDK7-208ENST00000512687 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
CDK7-208ENST00000512687 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
CDK7-208ENST00000512687 SAMD7Q7Z3H4 446 aa15.28■□□□□ 0.04
CDK7-208ENST00000512687 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
CDK7-208ENST00000512687 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
CDK7-208ENST00000512687 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
CDK7-208ENST00000512687 GRM8O00222 908 aa15.27■□□□□ 0.04
CDK7-208ENST00000512687 HSPA1AP0DMV8 641 aaKnown RBP15.27■□□□□ 0.04
CDK7-208ENST00000512687 HSPA1BP0DMV9 641 aaKnown RBP15.27■□□□□ 0.04
CDK7-208ENST00000512687 KLRK1P26718 216 aa15.27■□□□□ 0.04
CDK7-208ENST00000512687 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
CDK7-208ENST00000512687 VEGFBP49765 207 aa15.27■□□□□ 0.04
CDK7-208ENST00000512687 TBC1D10BQ4KMP7 808 aaPredicted RBP15.27■□□□□ 0.04
CDK7-208ENST00000512687 CST9Q5W186 159 aa15.27■□□□□ 0.04
CDK7-208ENST00000512687 TXNRD3Q86VQ6 643 aa15.27■□□□□ 0.04
CDK7-208ENST00000512687 MYH13Q9UKX3 1938 aa15.26■□□□□ 0.03
CDK7-208ENST00000512687 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
CDK7-208ENST00000512687 H7C1D1 291 aa15.26■□□□□ 0.03
CDK7-208ENST00000512687 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
CDK7-208ENST00000512687 TRMT2AQ8IZ69 625 aaKnown RBP15.26■□□□□ 0.03
CDK7-208ENST00000512687 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms