RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-216ENST00000512683 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-216ENST00000512683 MMP14P50281 582 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 GRM1Q13255 1194 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 AGBL3Q8NEM8 1001 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
VEGFA-216ENST00000512683 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
VEGFA-216ENST00000512683 HUNKP57058 714 aa16.19■□□□□ 0.18
VEGFA-216ENST00000512683 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
VEGFA-216ENST00000512683 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-216ENST00000512683 PODNQ7Z5L7 613 aa16.19■□□□□ 0.18
VEGFA-216ENST00000512683 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-216ENST00000512683 MYD88Q99836 296 aa16.19■□□□□ 0.18
VEGFA-216ENST00000512683 AOC2O75106 756 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 ATP2B4P23634 1241 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 ZNF280AP59817 542 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-216ENST00000512683 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 TBC1D10BQ4KMP7 808 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-216ENST00000512683 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
VEGFA-216ENST00000512683 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 GBA2Q9HCG7 927 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-216ENST00000512683 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 LAMB2P55268 1798 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 XDHP47989 1333 aa16.18■□□□□ 0.18
VEGFA-216ENST00000512683 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-216ENST00000512683 UFL1O94874 794 aa16.17■□□□□ 0.18
VEGFA-216ENST00000512683 NEXNQ0ZGT2 675 aa16.17■□□□□ 0.18
VEGFA-216ENST00000512683 RGMBQ6NW40 437 aa16.17■□□□□ 0.18
VEGFA-216ENST00000512683 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
VEGFA-216ENST00000512683 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-216ENST00000512683 RGS19P49795 217 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 FKBP1BP68106 108 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 KIF4BQ2VIQ3 1234 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 RSBN1LQ6PCB5 846 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-216ENST00000512683 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-216ENST00000512683 SAGE1Q9NXZ1 904 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 ZNF609O15014 1411 aa16.16■□□□□ 0.18
VEGFA-216ENST00000512683 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
VEGFA-216ENST00000512683 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
VEGFA-216ENST00000512683 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
VEGFA-216ENST00000512683 DUOX1Q9NRD9 1551 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 USP17L3A6NCW0 530 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 USP17L4A6NCW7 530 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 USP17L1Q7RTZ2 530 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 GMLQ99445 158 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 PITPNM2Q9BZ72 1349 aa16.14■□□□□ 0.17
VEGFA-216ENST00000512683 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 EGFRP00533 1210 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 USP17L8P0C7I0 530 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 CTSWP56202 376 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 IL16Q14005 1332 aa16.13■□□□□ 0.17
VEGFA-216ENST00000512683 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 FAM155AB1AL88 458 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-216ENST00000512683 H7C1W4 665 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 ZNF157P51786 506 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-216ENST00000512683 SCARF1Q14162 830 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 TAF1P21675 1872 aa16.12■□□□□ 0.17
VEGFA-216ENST00000512683 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 OGFOD1Q8N543 542 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 COA1Q9GZY4 146 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 MYOZ2Q9NPC6 264 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 GGA3Q9NZ52 723 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 MYO3BQ8WXR4 1341 aa16.11■□□□□ 0.17
VEGFA-216ENST00000512683 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
VEGFA-216ENST00000512683 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 ADM5C9JUS6 153 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 KIF23Q02241 960 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-216ENST00000512683 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 WWC1Q8IX03 1113 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
VEGFA-216ENST00000512683 NEURL1BA8MQ27 555 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 SLC10A3P09131 477 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
VEGFA-216ENST00000512683 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-216ENST00000512683 ANGEL2Q5VTE6 544 aaKnown RBP16.09■□□□□ 0.17
VEGFA-216ENST00000512683 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 MCOLN1Q9GZU1 580 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 TSKSQ9UJT2 592 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
VEGFA-216ENST00000512683 CSF1RP07333 972 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms