RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ZBTB1Q9Y2K1 713 aa11.74□□□□□ -0.53
MSH3-203ENST00000512531 HOXB7P09629 217 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 CHD1LQ86WJ1 897 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 TNNQ9UQP3 1299 aa11.73□□□□□ -0.53
MSH3-203ENST00000512531 LTBP3Q9NS15 1303 aa11.72□□□□□ -0.53
MSH3-203ENST00000512531 PDE6BP35913 854 aa11.72□□□□□ -0.53
MSH3-203ENST00000512531 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
MSH3-203ENST00000512531 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
MSH3-203ENST00000512531 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
MSH3-203ENST00000512531 NFKBIEO00221 500 aa11.71□□□□□ -0.53
MSH3-203ENST00000512531 GNAI3P08754 354 aa11.71□□□□□ -0.53
MSH3-203ENST00000512531 IL6STP40189 918 aaPredicted RBP11.71□□□□□ -0.53
MSH3-203ENST00000512531 RASSF7Q02833 373 aa11.71□□□□□ -0.53
MSH3-203ENST00000512531 TEFQ10587 303 aa11.71□□□□□ -0.53
MSH3-203ENST00000512531 APBB1O00213 710 aa11.7□□□□□ -0.54
MSH3-203ENST00000512531 PRELPP51888 382 aa11.7□□□□□ -0.54
MSH3-203ENST00000512531 FLIIQ13045 1269 aa11.7□□□□□ -0.54
MSH3-203ENST00000512531 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
MSH3-203ENST00000512531 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
MSH3-203ENST00000512531 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
MSH3-203ENST00000512531 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 PLCG2P16885 1265 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 HTRA3P83110 453 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
MSH3-203ENST00000512531 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
MSH3-203ENST00000512531 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
MSH3-203ENST00000512531 POTECB2RU33 542 aa11.68□□□□□ -0.54
MSH3-203ENST00000512531 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
MSH3-203ENST00000512531 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
MSH3-203ENST00000512531 ANKRD44Q8N8A2 993 aa11.68□□□□□ -0.54
MSH3-203ENST00000512531 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
MSH3-203ENST00000512531 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
MSH3-203ENST00000512531 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 GNAI2P04899 355 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 FKBP5Q13451 457 aaPredicted RBP11.67□□□□□ -0.54
MSH3-203ENST00000512531 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 CLEC4GQ6UXB4 293 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 LNPKQ9C0E8 428 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 FER1L6Q2WGJ9 1857 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
MSH3-203ENST00000512531 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 G3V3G9 751 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 TBC1D12O60347 775 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 TNS4Q8IZW8 715 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
MSH3-203ENST00000512531 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
MSH3-203ENST00000512531 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 SETDB2Q96T68 719 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
MSH3-203ENST00000512531 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
MSH3-203ENST00000512531 C21orf2O43822 256 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 SRGNP10124 158 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 ST5P78524 1137 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 MCM6Q14566 821 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 TSR1Q2NL82 804 aaKnown RBP11.65□□□□□ -0.54
MSH3-203ENST00000512531 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.54
MSH3-203ENST00000512531 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
MSH3-203ENST00000512531 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 A6NJR5 290 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 CDC45O75419 566 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
MSH3-203ENST00000512531 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
MSH3-203ENST00000512531 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
MSH3-203ENST00000512531 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
MSH3-203ENST00000512531 PCNTO95613 3336 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
MSH3-203ENST00000512531 MFAP1P55081 439 aaKnown RBP11.63□□□□□ -0.55
MSH3-203ENST00000512531 HSP90AB4PQ58FF6 505 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
MSH3-203ENST00000512531 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 ARFGEF2Q9Y6D5 1785 aa11.63□□□□□ -0.55
MSH3-203ENST00000512531 HAX1O00165 279 aa11.62□□□□□ -0.55
MSH3-203ENST00000512531 TRAK2O60296 914 aa11.62□□□□□ -0.55
MSH3-203ENST00000512531 A1BGP04217 495 aa11.62□□□□□ -0.55
MSH3-203ENST00000512531 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms