RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 TCEANC2Q96MN5 208 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 SEC62Q99442 399 aaKnown RBP10.94□□□□□ -0.66
CPNE4-210ENST00000512332 TEX13AQ9BXU3 409 aaPredicted RBP10.94□□□□□ -0.66
CPNE4-210ENST00000512332 XIRP1Q702N8 1843 aaKnown RBP10.94□□□□□ -0.66
CPNE4-210ENST00000512332 TCIRG1Q13488 830 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 LRRFIP1Q32MZ4 808 aaKnown RBP10.94□□□□□ -0.66
CPNE4-210ENST00000512332 Q6ZUG5 572 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 FBXL16Q8N461 479 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 SMARCC2Q8TAQ2 1214 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 NEUROD6Q96NK8 337 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 PLA2G12BQ9BX93 195 aa10.94□□□□□ -0.66
CPNE4-210ENST00000512332 ZSCAN16Q9H4T2 348 aaPredicted RBP10.94□□□□□ -0.66
CPNE4-210ENST00000512332 PFKFB2O60825 505 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 KDM4AO75164 1064 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 CCDC192P0DO97 292 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 HCLS1P14317 486 aaPredicted RBP10.93□□□□□ -0.66
CPNE4-210ENST00000512332 TIMM10P62072 90 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 EXOSC10Q01780 885 aaKnown RBP10.93□□□□□ -0.66
CPNE4-210ENST00000512332 CCDC129Q6ZRS4 1044 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 CHMP3Q9Y3E7 222 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 NDUFB9Q9Y6M9 179 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 GOLIM4O00461 696 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 RNF113AO15541 343 aaKnown RBP10.93□□□□□ -0.66
CPNE4-210ENST00000512332 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 AKAP2Q9Y2D5 859 aa10.93□□□□□ -0.66
CPNE4-210ENST00000512332 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 A0A1B0GUL7 405 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 LRRC24Q50LG9 513 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 GIMAP6Q6P9H5 292 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 ZBTB3Q9H5J0 574 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 CEP126Q9P2H0 1117 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 PCCAP05165 728 aaPredicted RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 ZFYP08048 801 aaPredicted RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 IFIT1P09914 478 aaKnown RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 HSPD1P10809 573 aaKnown RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 RESTQ13127 1097 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 NAA16Q6N069 864 aaPredicted RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 LEO1Q8WVC0 666 aaPredicted RBP10.92□□□□□ -0.66
CPNE4-210ENST00000512332 SPATA32Q96LK8 384 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 USP25Q9UHP3 1055 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 CFAP45Q9UL16 551 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 KIF3AQ9Y496 699 aa10.92□□□□□ -0.66
CPNE4-210ENST00000512332 ADCY5O95622 1261 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 CHGBP05060 677 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 PTMAP06454 111 aaKnown RBP10.91□□□□□ -0.66
CPNE4-210ENST00000512332 CSF1RP07333 972 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 EVCP57679 992 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 SCRN1Q12765 414 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 STK3Q13188 491 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 CCDC57Q2TAC2 916 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 BRF1Q92994 677 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 ZNF274Q96GC6 653 aaPredicted RBP10.91□□□□□ -0.66
CPNE4-210ENST00000512332 NUP62CLQ9H1M0 184 aa10.91□□□□□ -0.66
CPNE4-210ENST00000512332 GOLGA6L4A6NEF3 574 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 CCDC158Q5M9N0 1113 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 TMOD3Q9NYL9 352 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 MAST3O60307 1309 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 JAK2O60674 1132 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 TPM3P06753 285 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 HSP90B1P14625 803 aaKnown RBP10.9□□□□□ -0.66
CPNE4-210ENST00000512332 FGD1P98174 961 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 KIAA2012Q0VF49 1180 aa10.9□□□□□ -0.66
CPNE4-210ENST00000512332 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
CPNE4-210ENST00000512332 ZNF594Q96JF6 807 aaPredicted RBP10.9□□□□□ -0.66
CPNE4-210ENST00000512332 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
CPNE4-210ENST00000512332 E7EWF7 191 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 H3BQV1 296 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 DTNBO60941 627 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 CAVIN2O95810 425 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 LIG1P18858 919 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
CPNE4-210ENST00000512332 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 PUS3Q9BZE2 481 aaKnown RBP10.89□□□□□ -0.67
CPNE4-210ENST00000512332 CDHR2Q9BYE9 1310 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 ABCA3Q99758 1704 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 STARD3NLO95772 234 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 EVA1CP58658 441 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 TNMDQ9H2S6 317 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 CLSTN2Q9H4D0 955 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
CPNE4-210ENST00000512332 TFIP11Q9UBB9 837 aaKnown RBP10.89□□□□□ -0.67
CPNE4-210ENST00000512332 SALL1Q9NSC2 1324 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 HSPA2P54652 639 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 KIF6Q6ZMV9 814 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 RGS22Q8NE09 1264 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 695.3 ms