RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LARGE1O95461 756 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 CTDNEP1O95476 244 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 HSPA6P17066 643 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 PLEKHM2Q8IWE5 1019 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZRANB1Q9UGI0 708 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 A0A0G2JLW4 131 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 NYAP1Q6ZVC0 841 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 VWA8A3KMH1 1905 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 CMYA5Q8N3K9 4069 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 TTC28Q96AY4 2481 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 FZD9O00144 591 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 NPM3O75607 178 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 FAM163BP0C2L3 166 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 RABEP1Q15276 862 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 ATP2B3Q16720 1220 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 AMIGO3Q86WK7 504 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 SEPT12Q8IYM1 358 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 SP7Q8TDD2 431 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 HELZP42694 1942 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 RALBP1Q15311 655 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 SSH1Q8WYL5 1049 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 GTF2E1P29083 439 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 KRT27Q7Z3Y8 459 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC51AQ86UW1 340 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 BMPERQ8N8U9 685 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 DEKP35659 375 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 EIF4G2P78344 907 aaKnown RBP eCLIP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 IRX6P78412 446 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SNW1Q13573 536 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 VGLL2Q8N8G2 317 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 MTMR14Q8NCE2 650 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 DOCK4Q8N1I0 1966 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 PLXNB3Q9ULL4 1909 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 PDS5AQ29RF7 1337 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 M0R2N6 131 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLFN14P0C7P3 912 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 PBX1P40424 430 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 RTL5Q5HYW3 569 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 TRIM65Q6PJ69 517 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 FOXP4Q8IVH2 680 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 ARMC5Q96C12 935 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SYT17Q9BSW7 474 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC12A5Q9H2X9 1139 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF536O15090 1300 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 RASIP1Q5U651 963 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 ATP1B4Q9UN42 357 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 SCN1AP35498 2009 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 DOCK3Q8IZD9 2030 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 WNT7AO00755 349 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 MTRQ99707 1265 aa2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 FAM217BQ9NTX9 383 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-211ENST00000512009 CEP290O15078 2479 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 BRD1O95696 1058 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 UBTFP17480 764 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 IQCB1Q15051 598 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF827Q17R98 1081 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 MRIQ9BWK5 157 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 QTRT2Q9H974 415 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 LRRC4CQ9HCJ2 640 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 ABCC12Q96J65 1359 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 PFASO15067 1338 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 BMP8BP34820 402 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 EIF5P55010 431 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC20A2Q08357 652 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 RASEFQ8IZ41 740 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 FLAD1Q8NFF5 587 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 IFT43Q96FT9 208 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 H7C1W4 665 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 FUT2Q10981 343 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 C1orf53Q5VUE5 145 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 TCP11L2Q8N4U5 519 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 C8orf58Q8NAV2 365 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 KCNN1Q92952 543 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 DCTPP1Q9H773 170 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 MORC2Q9Y6X9 1032 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 SOX12O15370 315 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 GCP02774 474 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 PSMD1Q99460 953 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 TERF1P54274 439 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 FKBP1AP62942 108 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 KCNH5Q8NCM2 988 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 NUMBLQ9Y6R0 609 aa2.16□□□□□ -2.06
TRAPPC13-211ENST00000512009 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 MYH11P35749 1972 aa2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 RNF225M0QZC1 329 aaPredicted RBP2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 MDM2Q00987 491 aaPredicted RBP2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 SPRED3Q2MJR0 410 aa2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 EMC10Q5UCC4 262 aa2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 ISM2Q6H9L7 571 aa2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 ANP32BQ92688 251 aaKnown RBP2.15□□□□□ -2.06
TRAPPC13-211ENST00000512009 REM2Q8IYK8 340 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAF1Q9H063 256 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 ALDH8A1Q9H2A2 487 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 L2HGDHQ9H9P8 463 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 MINK1Q8N4C8 1332 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 TTC3P53804 2025 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 ABL1P00519 1130 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 PROSER2Q86WR7 435 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 WDR63Q8IWG1 891 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms