RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 MMP20O60882 483 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 SASH3O75995 380 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 FGRP09769 529 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 TNP2Q05952 138 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 SFSWAPQ12872 951 aaKnown RBP8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 FAM177A1Q8N128 213 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 EHD4Q9H223 541 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
HMGB1P47-201ENST00000511281 PHF20L1A8MW92 1017 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 PWP1Q13610 501 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 SPATA32Q96LK8 384 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 TCF12Q99081 682 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 ZFYVE1Q9HBF4 777 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 KCNQ5Q9NR82 932 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 LATS2Q9NRM7 1088 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 TLR7Q9NYK1 1049 aaKnown RBP8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
HMGB1P47-201ENST00000511281 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 TARSP26639 723 aaKnown RBP8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 DPH6Q7L8W6 267 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 CCNJLQ8IV13 435 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 COPRSQ9NQ92 184 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 HCN2Q9UL51 889 aa8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P47-201ENST00000511281 H7C1W4 665 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 AXIN1O15169 862 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 RARAP10276 462 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 RLBP1P12271 317 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 DNAJA1P31689 397 aaKnown RBP8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 PAK2Q13177 524 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 FAM182BQ5T319 152 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 GPRASP2Q96D09 838 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 KBTBD4Q9NVX7 518 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 CADPSQ9ULU8 1353 aa8.34□□□□□ -1.07
HMGB1P47-201ENST00000511281 ITPKAP23677 461 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 SOGA3Q5TF21 947 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 NOP9Q86U38 636 aaKnown RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 TRIM22Q8IYM9 498 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 CEP120Q8N960 986 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 SEC16BQ96JE7 1060 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 BHLHE41Q9C0J9 482 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 NUCKS1Q9H1E3 243 aaKnown RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P47-201ENST00000511281 BNIP3LO60238 219 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 MAN1A2O60476 641 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 PSAPP07602 524 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 NRLP54845 237 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 HYAL2Q12891 473 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 TMEM74Q96NL1 305 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 HIRIP3Q9BW71 556 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 MARK1Q9P0L2 795 aa8.32□□□□□ -1.08
HMGB1P47-201ENST00000511281 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 FCGRTP55899 365 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 PTSQ03393 145 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 PLAURQ03405 335 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 COL13A1Q5TAT6 717 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 ZKSCAN3Q9BRR0 538 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
HMGB1P47-201ENST00000511281 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 NFKB1P19838 968 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 CCDC85BQ15834 202 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 PKDCCQ504Y2 493 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 RELL1Q8IUW5 271 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 KIAA0825Q8IV33 1275 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 RHOVQ96L33 236 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 OSMRQ99650 979 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 SPON2Q9BUD6 331 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P47-201ENST00000511281 NFKBIEO00221 500 aa8.29□□□□□ -1.08
HMGB1P47-201ENST00000511281 DBN1Q16643 649 aa8.29□□□□□ -1.08
HMGB1P47-201ENST00000511281 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
HMGB1P47-201ENST00000511281 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms