RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 PRKRIP1Q9H875 184 aaPredicted RBP10.78□□□□□ -0.68
TRIO-217ENST00000511019 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 SHTN1A0MZ66 631 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 DDX58O95786 925 aaKnown RBP10.77□□□□□ -0.69
TRIO-217ENST00000511019 TBC1D10BQ4KMP7 808 aaPredicted RBP10.77□□□□□ -0.69
TRIO-217ENST00000511019 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 DCPSQ96C86 337 aaKnown RBP10.77□□□□□ -0.69
TRIO-217ENST00000511019 ABHD8Q96I13 439 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 SEC31BQ9NQW1 1179 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 KCNQ5Q9NR82 932 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 ANKIB1Q9P2G1 1089 aa10.77□□□□□ -0.69
TRIO-217ENST00000511019 CA12O43570 354 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 ECE2O60344 883 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 PDE8AO60658 829 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
TRIO-217ENST00000511019 CCDC152Q4G0S7 254 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 CCDC30Q5VVM6 783 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 C8orf58Q8NAV2 365 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 JARID2Q92833 1246 aaPredicted RBP10.76□□□□□ -0.69
TRIO-217ENST00000511019 CWC25Q9NXE8 425 aaPredicted RBP10.76□□□□□ -0.69
TRIO-217ENST00000511019 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
TRIO-217ENST00000511019 VIL1P09327 827 aaKnown RBP10.75□□□□□ -0.69
TRIO-217ENST00000511019 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
TRIO-217ENST00000511019 HUNKP57058 714 aa10.75□□□□□ -0.69
TRIO-217ENST00000511019 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
TRIO-217ENST00000511019 METTL22Q9BUU2 404 aaPredicted RBP10.75□□□□□ -0.69
TRIO-217ENST00000511019 TSKSQ9UJT2 592 aa10.75□□□□□ -0.69
TRIO-217ENST00000511019 GGA1Q9UJY5 639 aa10.75□□□□□ -0.69
TRIO-217ENST00000511019 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
TRIO-217ENST00000511019 CCDC85CA6NKD9 419 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 UFL1O94874 794 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 EGFRP00533 1210 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 NOGQ13253 232 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 DLK2Q6UY11 383 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 ANKRD18AQ8IVF6 992 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
TRIO-217ENST00000511019 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
TRIO-217ENST00000511019 ATP2B4P23634 1241 aa10.73□□□□□ -0.69
TRIO-217ENST00000511019 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
TRIO-217ENST00000511019 KSR2Q6VAB6 950 aa10.73□□□□□ -0.69
TRIO-217ENST00000511019 SULF1Q8IWU6 871 aa10.73□□□□□ -0.69
TRIO-217ENST00000511019 GBA2Q9HCG7 927 aaPredicted RBP10.73□□□□□ -0.69
TRIO-217ENST00000511019 MAP3K2Q9Y2U5 619 aa10.73□□□□□ -0.69
TRIO-217ENST00000511019 PI4KAP2A4QPH2 592 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 ADM5C9JUS6 153 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
TRIO-217ENST00000511019 NEXNQ0ZGT2 675 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
TRIO-217ENST00000511019 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 TSPYL6Q8N831 410 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 PI4KAP1Q8N8J0 262 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
TRIO-217ENST00000511019 STK31Q9BXU1 1019 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 RTL9Q8NET4 1388 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 LAMB2P55268 1798 aa10.72□□□□□ -0.69
TRIO-217ENST00000511019 USP17L8P0C7I0 530 aa10.71□□□□□ -0.69
TRIO-217ENST00000511019 XDHP47989 1333 aa10.71□□□□□ -0.69
TRIO-217ENST00000511019 KIF23Q02241 960 aaPredicted RBP10.71□□□□□ -0.69
TRIO-217ENST00000511019 SCARF1Q14162 830 aa10.71□□□□□ -0.69
TRIO-217ENST00000511019 ZIC5Q96T25 663 aa10.71□□□□□ -0.69
TRIO-217ENST00000511019 DUOX1Q9NRD9 1551 aa10.71□□□□□ -0.69
TRIO-217ENST00000511019 TAF1P21675 1872 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
TRIO-217ENST00000511019 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 CTSWP56202 376 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 ZNF280AP59817 542 aaPredicted RBP10.7□□□□□ -0.7
TRIO-217ENST00000511019 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
TRIO-217ENST00000511019 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 TTLL11Q8NHH1 800 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 CDCA5Q96FF9 252 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 BSDC1Q9NW68 430 aaPredicted RBP10.7□□□□□ -0.7
TRIO-217ENST00000511019 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 TRPM7Q96QT4 1865 aa10.7□□□□□ -0.7
TRIO-217ENST00000511019 ASTN2O75129 1339 aaPredicted RBP10.69□□□□□ -0.7
TRIO-217ENST00000511019 ZBTB22O15209 634 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 IGKV5-2P06315 115 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 DGKZQ13574 1117 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 TWISTNBQ3B726 338 aaPredicted RBP10.69□□□□□ -0.7
TRIO-217ENST00000511019 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
TRIO-217ENST00000511019 MCOLN1Q9GZU1 580 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 MYOZ2Q9NPC6 264 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 MINPP1Q9UNW1 487 aa10.69□□□□□ -0.7
TRIO-217ENST00000511019 DDX60Q8IY21 1712 aaKnown RBP10.69□□□□□ -0.7
TRIO-217ENST00000511019 PCNTO95613 3336 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 LRRC37AA6NMS7 1700 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 WTIPA6NIX2 430 aaPredicted RBP10.68□□□□□ -0.7
TRIO-217ENST00000511019 H7C1W4 665 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 TRPA1O75762 1119 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
TRIO-217ENST00000511019 RGS19P49795 217 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 FKBP1BP68106 108 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 MLLT1Q03111 559 aaPredicted RBP10.68□□□□□ -0.7
TRIO-217ENST00000511019 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 CWF19L2Q2TBE0 894 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms