RNA–Protein interactions for RNA: ENST00000510499.1

TMED9-205, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-205ENST00000510499 COL4A1P02462 1669 aa12.73□□□□□ -0.37
TMED9-205ENST00000510499 KIAA0100Q14667 2235 aaKnown RBP12.72□□□□□ -0.37
TMED9-205ENST00000510499 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
TMED9-205ENST00000510499 ANXA1P04083 346 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 FKBP1BP68106 108 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 DOK7Q18PE1 504 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
TMED9-205ENST00000510499 TBC1D8O95759 1140 aa12.71□□□□□ -0.37
TMED9-205ENST00000510499 PDIA6Q15084 440 aa12.71□□□□□ -0.37
TMED9-205ENST00000510499 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.37
TMED9-205ENST00000510499 FBXO46Q6PJ61 603 aaPredicted RBP12.71□□□□□ -0.37
TMED9-205ENST00000510499 KCNQ5Q9NR82 932 aa12.71□□□□□ -0.37
TMED9-205ENST00000510499 POLLQ9UGP5 575 aa12.71□□□□□ -0.37
TMED9-205ENST00000510499 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
TMED9-205ENST00000510499 ZNF609O15014 1411 aa12.71□□□□□ -0.38
TMED9-205ENST00000510499 GPSM2P81274 684 aa12.7□□□□□ -0.38
TMED9-205ENST00000510499 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
TMED9-205ENST00000510499 HABP4Q5JVS0 413 aaKnown RBP12.7□□□□□ -0.38
TMED9-205ENST00000510499 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
TMED9-205ENST00000510499 HTTP42858 3142 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 G3V3G9 751 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 GPR25O00155 361 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
TMED9-205ENST00000510499 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 SCARF1Q14162 830 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
TMED9-205ENST00000510499 CENPFP49454 3210 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 PITPNM2Q9BZ72 1349 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
TMED9-205ENST00000510499 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
TMED9-205ENST00000510499 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
TMED9-205ENST00000510499 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
TMED9-205ENST00000510499 BRCA2P51587 3418 aa12.67□□□□□ -0.38
TMED9-205ENST00000510499 UFL1O94874 794 aa12.67□□□□□ -0.38
TMED9-205ENST00000510499 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
TMED9-205ENST00000510499 TTLL12Q14166 644 aaPredicted RBP12.67□□□□□ -0.38
TMED9-205ENST00000510499 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
TMED9-205ENST00000510499 AGBL3Q8NEM8 1001 aa12.67□□□□□ -0.38
TMED9-205ENST00000510499 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
TMED9-205ENST00000510499 CEP290O15078 2479 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 FKTNO75072 461 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
TMED9-205ENST00000510499 SF3B3Q15393 1217 aaKnown RBP12.66□□□□□ -0.38
TMED9-205ENST00000510499 FAM89AQ96GI7 184 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 MYOZ2Q9NPC6 264 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
TMED9-205ENST00000510499 LAMB1P07942 1786 aa12.66□□□□□ -0.38
TMED9-205ENST00000510499 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 NF2P35240 595 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 TM4SF4P48230 202 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
TMED9-205ENST00000510499 SCAF8Q9UPN6 1271 aaKnown RBP12.65□□□□□ -0.38
TMED9-205ENST00000510499 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
TMED9-205ENST00000510499 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
TMED9-205ENST00000510499 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
TMED9-205ENST00000510499 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
TMED9-205ENST00000510499 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
TMED9-205ENST00000510499 TRIOBPQ9H2D6 2365 aa12.64□□□□□ -0.39
TMED9-205ENST00000510499 PRAMEF18Q5VWM3 479 aa12.63□□□□□ -0.39
TMED9-205ENST00000510499 PLBD2Q8NHP8 589 aa12.63□□□□□ -0.39
TMED9-205ENST00000510499 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
TMED9-205ENST00000510499 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
TMED9-205ENST00000510499 TRIM17Q9Y577 477 aa12.63□□□□□ -0.39
TMED9-205ENST00000510499 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 IRS4O14654 1257 aaPredicted RBP12.62□□□□□ -0.39
TMED9-205ENST00000510499 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMED9-205ENST00000510499 INTS3Q68E01 1043 aaKnown RBP12.62□□□□□ -0.39
TMED9-205ENST00000510499 GMLQ99445 158 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 MYH3P11055 1940 aa12.62□□□□□ -0.39
TMED9-205ENST00000510499 ECM29Q5VYK3 1845 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
TMED9-205ENST00000510499 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 OTOP1Q7RTM1 612 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 XDHP47989 1333 aa12.6□□□□□ -0.39
TMED9-205ENST00000510499 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
TMED9-205ENST00000510499 RIPK4P57078 832 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms