RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
RETREG1-206ENST00000510362 FOXC1Q12948 553 aa12.24□□□□□ -0.45
RETREG1-206ENST00000510362 NBPF20Q3BBV1 942 aa12.24□□□□□ -0.45
RETREG1-206ENST00000510362 DOT1LQ8TEK3 1739 aa12.24□□□□□ -0.45
RETREG1-206ENST00000510362 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
RETREG1-206ENST00000510362 MAP4K5Q9Y4K4 846 aa12.24□□□□□ -0.45
RETREG1-206ENST00000510362 PLSCR1O15162 318 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
RETREG1-206ENST00000510362 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
RETREG1-206ENST00000510362 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 ZCRB1Q8TBF4 217 aaKnown RBP12.23□□□□□ -0.45
RETREG1-206ENST00000510362 CDK15Q96Q40 435 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 BTAF1O14981 1849 aa12.23□□□□□ -0.45
RETREG1-206ENST00000510362 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
RETREG1-206ENST00000510362 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
RETREG1-206ENST00000510362 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
RETREG1-206ENST00000510362 EZH2Q15910 746 aaKnown RBP12.22□□□□□ -0.45
RETREG1-206ENST00000510362 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
RETREG1-206ENST00000510362 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
RETREG1-206ENST00000510362 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
RETREG1-206ENST00000510362 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
RETREG1-206ENST00000510362 ESPNB1AK53 854 aa12.21□□□□□ -0.45
RETREG1-206ENST00000510362 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
RETREG1-206ENST00000510362 RNF135Q8IUD6 432 aa12.21□□□□□ -0.45
RETREG1-206ENST00000510362 MPNDQ8N594 471 aa12.21□□□□□ -0.45
RETREG1-206ENST00000510362 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.45
RETREG1-206ENST00000510362 GDF9O60383 454 aa12.2□□□□□ -0.46
RETREG1-206ENST00000510362 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
RETREG1-206ENST00000510362 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
RETREG1-206ENST00000510362 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
RETREG1-206ENST00000510362 RGS20O76081 388 aa12.19□□□□□ -0.46
RETREG1-206ENST00000510362 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
RETREG1-206ENST00000510362 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
RETREG1-206ENST00000510362 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
RETREG1-206ENST00000510362 ATP9BO43861 1147 aa12.18□□□□□ -0.46
RETREG1-206ENST00000510362 SKIP12755 728 aa12.18□□□□□ -0.46
RETREG1-206ENST00000510362 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
RETREG1-206ENST00000510362 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
RETREG1-206ENST00000510362 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
RETREG1-206ENST00000510362 KCNQ2O43526 872 aa12.17□□□□□ -0.46
RETREG1-206ENST00000510362 FSHRP23945 695 aa12.17□□□□□ -0.46
RETREG1-206ENST00000510362 GRM5P41594 1212 aa12.17□□□□□ -0.46
RETREG1-206ENST00000510362 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
RETREG1-206ENST00000510362 TRIM67Q6ZTA4 783 aa12.17□□□□□ -0.46
RETREG1-206ENST00000510362 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
RETREG1-206ENST00000510362 MAFBQ9Y5Q3 323 aaPredicted RBP12.17□□□□□ -0.46
RETREG1-206ENST00000510362 ADH1CP00326 375 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 MTHFSP49914 203 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 RAB15P59190 212 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 PLPP7Q8NBV4 271 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 LY75O60449 1722 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 ITGB4P16144 1822 aa12.16□□□□□ -0.46
RETREG1-206ENST00000510362 LRP5O75197 1615 aa12.15□□□□□ -0.46
RETREG1-206ENST00000510362 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
RETREG1-206ENST00000510362 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
RETREG1-206ENST00000510362 IL13P35225 146 aa12.15□□□□□ -0.46
RETREG1-206ENST00000510362 SNIP1Q8TAD8 396 aaKnown RBP12.15□□□□□ -0.46
RETREG1-206ENST00000510362 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
RETREG1-206ENST00000510362 KDRP35968 1356 aa12.15□□□□□ -0.46
RETREG1-206ENST00000510362 CYP27B1O15528 508 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 RFX1P22670 979 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
RETREG1-206ENST00000510362 TXNRD1Q16881 649 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 AMOTQ4VCS5 1084 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
RETREG1-206ENST00000510362 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
RETREG1-206ENST00000510362 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
RETREG1-206ENST00000510362 PRR20EP86478 221 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 PRR20CP86479 221 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 PRR20DP86480 221 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 PRR20BP86481 221 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 PRR20AP86496 221 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
RETREG1-206ENST00000510362 R3HDM1Q15032 1099 aaKnown RBP12.13□□□□□ -0.47
RETREG1-206ENST00000510362 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
RETREG1-206ENST00000510362 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 PHKG2P15735 406 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 NR5A1Q13285 461 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 MAP7D1Q3KQU3 841 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
RETREG1-206ENST00000510362 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 CYP4X1Q8N118 509 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 TOR4AQ9NXH8 423 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
RETREG1-206ENST00000510362 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
RETREG1-206ENST00000510362 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms