RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
CALCOCO2-217ENST00000510356 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
CALCOCO2-217ENST00000510356 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
CALCOCO2-217ENST00000510356 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
CALCOCO2-217ENST00000510356 NLRP7Q8WX94 980 aa11.23□□□□□ -0.61
CALCOCO2-217ENST00000510356 ZNF541Q9H0D2 1346 aa11.23□□□□□ -0.61
CALCOCO2-217ENST00000510356 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 ALDH1B1P30837 517 aa11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 GRIPAP1Q4V328 841 aa11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 ZNF277Q9NRM2 450 aaPredicted RBP11.22□□□□□ -0.61
CALCOCO2-217ENST00000510356 PDE4DIPQ5VU43 2346 aa11.21□□□□□ -0.61
CALCOCO2-217ENST00000510356 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
CALCOCO2-217ENST00000510356 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
CALCOCO2-217ENST00000510356 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
CALCOCO2-217ENST00000510356 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
CALCOCO2-217ENST00000510356 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.62
CALCOCO2-217ENST00000510356 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 PDE4DQ08499 809 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 CST9Q5W186 159 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 TPTE2Q6XPS3 522 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 SAPCD2Q86UD0 394 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 SYNE4Q8N205 404 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 PSMD1Q99460 953 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 LGR6Q9HBX8 967 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-217ENST00000510356 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 AOC2O75106 756 aa11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 DNAJB2P25686 324 aa11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 NOGQ13253 232 aa11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 AEBP1Q8IUX7 1158 aa11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 GJA3Q9Y6H8 435 aa11.19□□□□□ -0.62
CALCOCO2-217ENST00000510356 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-217ENST00000510356 SLX4Q8IY92 1834 aa11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 ZFRQ96KR1 1074 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 SAGE1Q9NXZ1 904 aa11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 ANKRD31Q8N7Z5 1873 aa11.17□□□□□ -0.62
CALCOCO2-217ENST00000510356 CAMTA2O94983 1202 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 EPS15P42566 896 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 TMEM134Q9H6X4 195 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 ADARB2Q9NS39 739 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 MRC1P22897 1456 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
CALCOCO2-217ENST00000510356 GOLGA8CPA6NN73 597 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 TRAF5O00463 557 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 IL13P35225 146 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 SCNN1DP51172 638 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 SOX10P56693 466 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 TEFQ10587 303 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 TMX4Q9H1E5 349 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
CALCOCO2-217ENST00000510356 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.63
CALCOCO2-217ENST00000510356 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
CALCOCO2-217ENST00000510356 ARFGEF2Q9Y6D5 1785 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 CLCN1P35523 988 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
CALCOCO2-217ENST00000510356 LTBP1Q14766 1721 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 GPRC5DQ9NZD1 345 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 PGAP2Q9UHJ9 254 aa11.13□□□□□ -0.63
CALCOCO2-217ENST00000510356 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 A1BGP04217 495 aa11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 CTU1Q7Z7A3 348 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 NYXQ9GZU5 481 aa11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
CALCOCO2-217ENST00000510356 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
CALCOCO2-217ENST00000510356 CASP8AP2Q9UKL3 1982 aa11.11□□□□□ -0.63
CALCOCO2-217ENST00000510356 MTHFSDQ2M296 383 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-217ENST00000510356 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
CALCOCO2-217ENST00000510356 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms