RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 CTNNBL1Q8WYA6 563 aaPredicted RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 C8orf37Q96NL8 207 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 TUBB6Q9BUF5 446 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 TNMDQ9H2S6 317 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 MKL2Q9ULH7 1088 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 FAF1Q9UNN5 650 aaPredicted RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 ARHGEF9O43307 516 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 MYO1BO43795 1136 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 RNASELQ05823 741 aaKnown RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 MAPK8IP2Q13387 824 aaPredicted RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 SEPT2Q15019 361 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 MAP3K11Q16584 847 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 MCTP2Q6DN12 878 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 RNF10Q8N5U6 811 aaKnown RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 ANKRD24Q8TF21 1146 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 IQCDQ96DY2 449 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 MAML3Q96JK9 1138 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 CTAGE1Q96RT6 745 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 ACTR5Q9H9F9 607 aaPredicted RBP4.09□□□□□ -1.76
USP53-205ENST00000509769 RSPH14Q9UHP6 348 aa4.09□□□□□ -1.76
USP53-205ENST00000509769 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 FRMD3A2A2Y4 597 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 SERPINC1P01008 464 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CFAP100Q494V2 611 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CEP85LQ5SZL2 805 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 AMOTL1Q8IY63 956 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CCDC170Q8IYT3 715 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 ZCRB1Q8TBF4 217 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 KIAA1524Q8TCG1 905 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 PAWRQ96IZ0 340 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 NUP62CLQ9H1M0 184 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 PARVBQ9HBI1 364 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 SCINQ9Y6U3 715 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 LRPPRCP42704 1394 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 CLTCQ00610 1675 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 RTEL1-TNFRSF6BF6WH68 1400 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CCDC160A6NGH7 325 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 K7ELQ4 463 aaPredicted RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 CPLX1O14810 134 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 GRIN3BO60391 1043 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 DTNBO60941 627 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 INAQ16352 499 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CFAP157Q5JU67 520 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 TXNDC2Q86VQ3 553 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 PIP4K2CQ8TBX8 421 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 STAC3Q96MF2 364 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 PHAXQ9H814 394 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 UTP6Q9NYH9 597 aaKnown RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 NEURL4Q96JN8 1562 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 DCCP43146 1447 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 A0A087WUV0 522 aaPredicted RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 PLIN1O60240 522 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 SMIM24O75264 130 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 CALCOCO2Q13137 446 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 KIF4BQ2VIQ3 1234 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 GGT6Q6P531 493 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 ARMC2Q8NEN0 867 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 GCC1Q96CN9 775 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 SCAND2PQ9GZW5 306 aaPredicted RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 EXOC1Q9NV70 894 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 ZBTB12Q9Y330 459 aaPredicted RBP4.08□□□□□ -1.76
USP53-205ENST00000509769 ELP1O95163 1332 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 WASHC2CQ9Y4E1 1318 aa4.08□□□□□ -1.76
USP53-205ENST00000509769 ANKRD62A6NC57 917 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 LMNAP02545 664 aaKnown RBP4.07□□□□□ -1.76
USP53-205ENST00000509769 KRT4P19013 534 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 NBPF10Q6P3W6 841 aaKnown RBP4.07□□□□□ -1.76
USP53-205ENST00000509769 P3H4Q92791 437 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 SAAL1Q96ER3 474 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 BCL2L13Q9BXK5 485 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 BACH2Q9BYV9 841 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 CEP131Q9UPN4 1083 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 ZNF148Q9UQR1 794 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 CD2APQ9Y5K6 639 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 SETD5Q9C0A6 1442 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 RPGRIP1LQ68CZ1 1315 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 ADGBQ8N7X0 1667 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 CTAGE15A4D2H0 777 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 GOLGA8BA8MQT2 603 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 CTAGE8P0CG41 777 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 RANBP1P43487 201 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 MXRA7P84157 204 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 KIF5AQ12840 1032 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 ANGPT1Q15389 498 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 KLHL40Q2TBA0 621 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 AMOTQ4VCS5 1084 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 SOGA3Q5TF21 947 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 ICE2Q659A1 982 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 RUFY4Q6ZNE9 571 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 CTAGE4Q8IX94 777 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 DHX37Q8IY37 1157 aaKnown RBP4.07□□□□□ -1.76
USP53-205ENST00000509769 RASEFQ8IZ41 740 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 AFAP1L1Q8TED9 768 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 USP33Q8TEY7 942 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 TSNARE1Q96NA8 513 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 GOPCQ9HD26 462 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 COPG1Q9Y678 874 aaKnown RBP4.07□□□□□ -1.76
USP53-205ENST00000509769 CCDC144AA2RUR9 1427 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 SPHKAPQ2M3C7 1700 aa4.07□□□□□ -1.76
USP53-205ENST00000509769 KANK1Q14678 1352 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms