RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 KRT32Q14532 448 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 MCMDC2Q4G0Z9 681 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 CREB3L3Q68CJ9 461 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
SSBP2-213ENST00000509743 CLEC17AQ6ZS10 378 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 CCDC85AQ96PX6 553 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-213ENST00000509743 UPF3BQ9BZI7 483 aaKnown RBP9.43□□□□□ -0.9
SSBP2-213ENST00000509743 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 SLC27A2O14975 620 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 RNF113AO15541 343 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 TAF5LO75529 589 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 PDE8BO95263 885 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 HMGB2P26583 209 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 SSFA2P28290 1259 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 ZMYM1Q5SVZ6 1142 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 VPS53Q5VIR6 699 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 DDX46Q7L014 1031 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 LPIN2Q92539 896 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 EDC3Q96F86 508 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 TTC14Q96N46 770 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 NYXQ9GZU5 481 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 NARFQ9UHQ1 456 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
SSBP2-213ENST00000509743 CYP46A1Q9Y6A2 500 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
SSBP2-213ENST00000509743 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 GOLGA6L22H0YM25 854 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 HCLS1P14317 486 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 CASTP20810 708 aaKnown RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 ADORA1P30542 326 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 IGHMBP2P38935 993 aaKnown RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 TTF1Q15361 905 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 ZNF589Q86UQ0 364 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 MPHOSPH8Q99549 860 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 DSCC1Q9BVC3 393 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.41□□□□□ -0.98e-7■■■■■ 37.5
SSBP2-213ENST00000509743 ALDH8A1Q9H2A2 487 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
SSBP2-213ENST00000509743 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
SSBP2-213ENST00000509743 GNPATO15228 680 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-213ENST00000509743 SLC5A1P13866 664 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-213ENST00000509743 AK2P54819 239 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 ANKRD1Q15327 319 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
SSBP2-213ENST00000509743 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-213ENST00000509743 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-213ENST00000509743 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
SSBP2-213ENST00000509743 SPEF2Q9C093 1822 aa9.4□□□□□ -0.91
SSBP2-213ENST00000509743 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-213ENST00000509743 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 ZPR1O75312 459 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 ADRA2BP18089 450 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 FGFR2P21802 821 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSBP2-213ENST00000509743 GSE1Q14687 1217 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-213ENST00000509743 SLC10A5Q5PT55 438 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-213ENST00000509743 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 SCN7AQ01118 1682 aa9.39□□□□□ -0.91
SSBP2-213ENST00000509743 MAST3O60307 1309 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
SSBP2-213ENST00000509743 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
SSBP2-213ENST00000509743 RPS6KB1P23443 525 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 DEKP35659 375 aaKnown RBP9.38□□□□□ -0.91
SSBP2-213ENST00000509743 ZAP70P43403 619 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 FAM196AQ6ZSG2 479 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
SSBP2-213ENST00000509743 APPBP2Q92624 585 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
SSBP2-213ENST00000509743 CTNNA3Q9UI47 895 aa9.38□□□□□ -0.91
SSBP2-213ENST00000509743 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-213ENST00000509743 ERFEQ4G0M1 354 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 NOL8Q76FK4 1167 aaKnown RBP9.37□□□□□ -0.91
SSBP2-213ENST00000509743 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms