RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 VEGFAP15692 232 aaPredicted RBP20.56■□□□□ 0.88
SKP2-205ENST00000509692 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
SKP2-205ENST00000509692 SUPT20HQ8NEM7 779 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 CSF1RP07333 972 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 UBTFL1P0CB47 393 aaPredicted RBP20.56■□□□□ 0.88
SKP2-205ENST00000509692 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
SKP2-205ENST00000509692 GNAI3P08754 354 aa20.55■□□□□ 0.88
SKP2-205ENST00000509692 FOXO4P98177 505 aa20.55■□□□□ 0.88
SKP2-205ENST00000509692 SUCLG2Q96I99 432 aa20.55■□□□□ 0.88
SKP2-205ENST00000509692 POLLQ9UGP5 575 aa20.55■□□□□ 0.88
SKP2-205ENST00000509692 KIAA2012Q0VF49 1180 aa20.54■□□□□ 0.88
SKP2-205ENST00000509692 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
SKP2-205ENST00000509692 EPHA10Q5JZY3 1008 aa20.54■□□□□ 0.88
SKP2-205ENST00000509692 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
SKP2-205ENST00000509692 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
SKP2-205ENST00000509692 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 DDX19BQ9UMR2 479 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 ITGA6P23229 1130 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
SKP2-205ENST00000509692 TBC1D16Q8TBP0 767 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 KAZALD1Q96I82 304 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 PODXL2Q9NZ53 605 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 HDAC5Q9UQL6 1122 aa20.53■□□□□ 0.88
SKP2-205ENST00000509692 C6orf229H3BNL8 230 aa20.52■□□□□ 0.88
SKP2-205ENST00000509692 EIF6P56537 245 aaKnown RBP20.52■□□□□ 0.88
SKP2-205ENST00000509692 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
SKP2-205ENST00000509692 GPR101Q96P66 508 aaPredicted RBP20.52■□□□□ 0.88
SKP2-205ENST00000509692 GPC2Q8N158 579 aa20.51■□□□□ 0.87
SKP2-205ENST00000509692 RBM46Q8TBY0 533 aaKnown RBP20.51■□□□□ 0.87
SKP2-205ENST00000509692 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
SKP2-205ENST00000509692 BSDC1Q9NW68 430 aaPredicted RBP20.51■□□□□ 0.87
SKP2-205ENST00000509692 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
SKP2-205ENST00000509692 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
SKP2-205ENST00000509692 SCN4AP35499 1836 aa20.51■□□□□ 0.87
SKP2-205ENST00000509692 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
SKP2-205ENST00000509692 ZNRF3Q9ULT6 936 aa20.5■□□□□ 0.87
SKP2-205ENST00000509692 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
SKP2-205ENST00000509692 RIMBP2O15034 1052 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 GNAI2P04899 355 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 CHMP4BQ9H444 224 aaKnown RBP20.49■□□□□ 0.87
SKP2-205ENST00000509692 GJA3Q9Y6H8 435 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 WTIPA6NIX2 430 aaPredicted RBP20.49■□□□□ 0.87
SKP2-205ENST00000509692 UFL1O94874 794 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 CXCL9Q07325 125 aa20.49■□□□□ 0.87
SKP2-205ENST00000509692 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 IGHMBP2P38935 993 aaKnown RBP20.48■□□□□ 0.87
SKP2-205ENST00000509692 RABL6Q3YEC7 729 aaPredicted RBP20.48■□□□□ 0.87
SKP2-205ENST00000509692 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 GGA1Q9UJY5 639 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 CHMP3Q9Y3E7 222 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 XDHP47989 1333 aa20.48■□□□□ 0.87
SKP2-205ENST00000509692 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
SKP2-205ENST00000509692 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
SKP2-205ENST00000509692 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
SKP2-205ENST00000509692 DBNDD1Q9H9R9 158 aa20.47■□□□□ 0.87
SKP2-205ENST00000509692 POTEIP0CG38 1075 aa20.46■□□□□ 0.87
SKP2-205ENST00000509692 POTEJP0CG39 1038 aa20.46■□□□□ 0.87
SKP2-205ENST00000509692 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
SKP2-205ENST00000509692 EYA3Q99504 573 aa20.46■□□□□ 0.87
SKP2-205ENST00000509692 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
SKP2-205ENST00000509692 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
SKP2-205ENST00000509692 RAD17O75943 681 aa20.45■□□□□ 0.87
SKP2-205ENST00000509692 DOK7Q18PE1 504 aa20.45■□□□□ 0.87
SKP2-205ENST00000509692 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.87
SKP2-205ENST00000509692 ZC3H12CQ9C0D7 883 aaKnown RBP20.45■□□□□ 0.87
SKP2-205ENST00000509692 HACL1Q9UJ83 578 aa20.45■□□□□ 0.87
SKP2-205ENST00000509692 SCNN1DP51172 638 aa20.45■□□□□ 0.86
SKP2-205ENST00000509692 HSPA6P17066 643 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 ATP2B4P23634 1241 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 FSTL1Q12841 308 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 CIAPIN1Q6FI81 312 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 SMC1BQ8NDV3 1235 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 ZNF594Q96JF6 807 aaPredicted RBP20.44■□□□□ 0.86
SKP2-205ENST00000509692 KCNQ5Q9NR82 932 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 SCN9AQ15858 1988 aa20.44■□□□□ 0.86
SKP2-205ENST00000509692 ECE2O60344 883 aa20.43■□□□□ 0.86
SKP2-205ENST00000509692 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
SKP2-205ENST00000509692 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
SKP2-205ENST00000509692 EPHX2P34913 555 aa20.42■□□□□ 0.86
SKP2-205ENST00000509692 CHRNDQ07001 517 aa20.42■□□□□ 0.86
SKP2-205ENST00000509692 EPS15P42566 896 aa20.42■□□□□ 0.86
SKP2-205ENST00000509692 A0A1B0GUL6 1792 aa20.41■□□□□ 0.86
SKP2-205ENST00000509692 GMPSP49915 693 aaPredicted RBP20.41■□□□□ 0.86
SKP2-205ENST00000509692 MTX1Q13505 466 aa20.41■□□□□ 0.86
SKP2-205ENST00000509692 TNIP1Q15025 636 aa20.41■□□□□ 0.86
SKP2-205ENST00000509692 PSMD14O00487 310 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
SKP2-205ENST00000509692 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
SKP2-205ENST00000509692 EXOC6Q8TAG9 804 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 ANKRD2Q9GZV1 360 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 LEMD3Q9Y2U8 911 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 PCNTO95613 3336 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
SKP2-205ENST00000509692 MED23Q9ULK4 1368 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms