RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SMC1BQ8NDV3 1235 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 EYA3Q99504 573 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 ZC3H12CQ9C0D7 883 aaKnown RBP20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 HACL1Q9UJ83 578 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
PDLIM5-212ENST00000509333 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
PDLIM5-212ENST00000509333 ANKRD18BA2A2Z9 1011 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 POTEIP0CG38 1075 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 POTEJP0CG39 1038 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 IGHMBP2P38935 993 aaKnown RBP20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 DOK7Q18PE1 504 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 KCNQ5Q9NR82 932 aa20.4■□□□□ 0.86
PDLIM5-212ENST00000509333 XDHP47989 1333 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 RAD17O75943 681 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 UFL1O94874 794 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 EPHX2P34913 555 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 SCNN1DP51172 638 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 IFIT5Q13325 482 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 TNIP1Q15025 636 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 SUCLG2Q96I99 432 aa20.39■□□□□ 0.85
PDLIM5-212ENST00000509333 EPS15P42566 896 aa20.38■□□□□ 0.85
PDLIM5-212ENST00000509333 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
PDLIM5-212ENST00000509333 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
PDLIM5-212ENST00000509333 DBNDD1Q9H9R9 158 aa20.38■□□□□ 0.85
PDLIM5-212ENST00000509333 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
PDLIM5-212ENST00000509333 LRRC37AA6NMS7 1700 aa20.37■□□□□ 0.85
PDLIM5-212ENST00000509333 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
PDLIM5-212ENST00000509333 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
PDLIM5-212ENST00000509333 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 ANKRD2Q9GZV1 360 aa20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 LEMD3Q9Y2U8 911 aa20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 CHMP3Q9Y3E7 222 aa20.36■□□□□ 0.85
PDLIM5-212ENST00000509333 ECE2O60344 883 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 BCAR3O75815 825 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 GMPSP49915 693 aaPredicted RBP20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 APLP1P51693 650 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 LDHDQ86WU2 507 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
PDLIM5-212ENST00000509333 MYH3P11055 1940 aa20.34■□□□□ 0.85
PDLIM5-212ENST00000509333 PSMD14O00487 310 aa20.34■□□□□ 0.85
PDLIM5-212ENST00000509333 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
PDLIM5-212ENST00000509333 CHRNDQ07001 517 aa20.34■□□□□ 0.85
PDLIM5-212ENST00000509333 SCN4AP35499 1836 aa20.34■□□□□ 0.85
PDLIM5-212ENST00000509333 ITGBL1O95965 494 aaPredicted RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 VIL1P09327 827 aaKnown RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 EAPPQ56P03 285 aaPredicted RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 TXNRD3Q86VQ6 643 aa20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 DNAJC5GQ8N7S2 189 aa20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 ANKRD44Q8N8A2 993 aa20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 DPF2Q92785 391 aa20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 CNOT7Q9UIV1 285 aaKnown RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 CLEC11AQ9Y240 323 aa20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 ZBTB12Q9Y330 459 aaPredicted RBP20.33■□□□□ 0.85
PDLIM5-212ENST00000509333 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 G3V3G9 751 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 LDHAL6AQ6ZMR3 332 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
PDLIM5-212ENST00000509333 ZNF804BA4D1E1 1349 aa20.31■□□□□ 0.84
PDLIM5-212ENST00000509333 IPO8O15397 1037 aaKnown RBP20.31■□□□□ 0.84
PDLIM5-212ENST00000509333 TAF5LO75529 589 aa20.31■□□□□ 0.84
PDLIM5-212ENST00000509333 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
PDLIM5-212ENST00000509333 SNAP23O00161 211 aa20.3■□□□□ 0.84
PDLIM5-212ENST00000509333 CNTROBQ8N137 903 aa20.3■□□□□ 0.84
PDLIM5-212ENST00000509333 PUS3Q9BZE2 481 aaKnown RBP20.3■□□□□ 0.84
PDLIM5-212ENST00000509333 ADARB2Q9NS39 739 aaKnown RBP20.3■□□□□ 0.84
PDLIM5-212ENST00000509333 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
PDLIM5-212ENST00000509333 CEP350Q5VT06 3117 aa20.29■□□□□ 0.84
PDLIM5-212ENST00000509333 SHTN1A0MZ66 631 aa20.29■□□□□ 0.84
PDLIM5-212ENST00000509333 HIRAP54198 1017 aaPredicted RBP20.29■□□□□ 0.84
PDLIM5-212ENST00000509333 HTRA3P83110 453 aa20.29■□□□□ 0.84
PDLIM5-212ENST00000509333 PGAP2Q9UHJ9 254 aa20.29■□□□□ 0.84
PDLIM5-212ENST00000509333 H7C1D1 291 aa20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 C15orf52Q6ZUT6 534 aaKnown RBP20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 COA1Q9GZY4 146 aa20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 MED23Q9ULK4 1368 aa20.28■□□□□ 0.84
PDLIM5-212ENST00000509333 KIF16BQ96L93 1317 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 TRIM27P14373 513 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 RPS12P25398 132 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 KLRK1P26718 216 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 TNNQ9UQP3 1299 aa20.27■□□□□ 0.84
PDLIM5-212ENST00000509333 USP17L3A6NCW0 530 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms