RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 IL16Q14005 1332 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 PI4KAP2A4QPH2 592 aa14.05□□□□□ -0.16
RNF4-212ENST00000509258 YDJCA8MPS7 323 aa14.05□□□□□ -0.16
RNF4-212ENST00000509258 WASHC4Q2M389 1173 aa14.05□□□□□ -0.16
RNF4-212ENST00000509258 PI4KAP1Q8N8J0 262 aa14.05□□□□□ -0.16
RNF4-212ENST00000509258 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
RNF4-212ENST00000509258 GLIS2Q9BZE0 524 aaPredicted RBP14.05□□□□□ -0.16
RNF4-212ENST00000509258 SHTN1A0MZ66 631 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 H7C1D1 291 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 CA12O43570 354 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 GPSM2P81274 684 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 CWF19L2Q2TBE0 894 aaKnown RBP14.04□□□□□ -0.16
RNF4-212ENST00000509258 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 FAM9BQ8IZU0 186 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 CCDC191Q8NCU4 936 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 TRPM4Q8TD43 1214 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 ABHD8Q96I13 439 aa14.04□□□□□ -0.16
RNF4-212ENST00000509258 CNOT7Q9UIV1 285 aaKnown RBP14.04□□□□□ -0.16
RNF4-212ENST00000509258 NSFL1CQ9UNZ2 370 aaKnown RBP14.04□□□□□ -0.16
RNF4-212ENST00000509258 VAMP4O75379 141 aa14.03□□□□□ -0.16
RNF4-212ENST00000509258 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
RNF4-212ENST00000509258 HIRAP54198 1017 aaPredicted RBP14.03□□□□□ -0.16
RNF4-212ENST00000509258 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
RNF4-212ENST00000509258 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
RNF4-212ENST00000509258 KSR2Q6VAB6 950 aa14.03□□□□□ -0.16
RNF4-212ENST00000509258 DPF2Q92785 391 aa14.03□□□□□ -0.16
RNF4-212ENST00000509258 ZNF408Q9H9D4 720 aa14.03□□□□□ -0.16
RNF4-212ENST00000509258 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
RNF4-212ENST00000509258 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
RNF4-212ENST00000509258 WTIPA6NIX2 430 aaPredicted RBP14.02□□□□□ -0.17
RNF4-212ENST00000509258 AOC2O75106 756 aa14.02□□□□□ -0.17
RNF4-212ENST00000509258 RPS12P25398 132 aaKnown RBP14.02□□□□□ -0.17
RNF4-212ENST00000509258 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
RNF4-212ENST00000509258 EYA3Q99504 573 aa14.02□□□□□ -0.17
RNF4-212ENST00000509258 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.17
RNF4-212ENST00000509258 KCNQ5Q9NR82 932 aa14.02□□□□□ -0.17
RNF4-212ENST00000509258 NEURL1BA8MQ27 555 aa14.01□□□□□ -0.17
RNF4-212ENST00000509258 C6orf229H3BNL8 230 aa14.01□□□□□ -0.17
RNF4-212ENST00000509258 PSMD14O00487 310 aa14.01□□□□□ -0.17
RNF4-212ENST00000509258 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
RNF4-212ENST00000509258 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
RNF4-212ENST00000509258 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
RNF4-212ENST00000509258 RTL9Q8NET4 1388 aa14□□□□□ -0.17
RNF4-212ENST00000509258 ZNF521Q96K83 1311 aa14□□□□□ -0.17
RNF4-212ENST00000509258 RIMBP2O15034 1052 aa14□□□□□ -0.17
RNF4-212ENST00000509258 ECE2O60344 883 aa14□□□□□ -0.17
RNF4-212ENST00000509258 PDE8AO60658 829 aa14□□□□□ -0.17
RNF4-212ENST00000509258 DDX58O95786 925 aaKnown RBP14□□□□□ -0.17
RNF4-212ENST00000509258 CASP7P55210 303 aa14□□□□□ -0.17
RNF4-212ENST00000509258 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
RNF4-212ENST00000509258 FLIIQ13045 1269 aa14□□□□□ -0.17
RNF4-212ENST00000509258 F6X3S4 739 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 NOGQ13253 232 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
RNF4-212ENST00000509258 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 TBC1D16Q8TBP0 767 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 TSKSQ9UJT2 592 aa13.99□□□□□ -0.17
RNF4-212ENST00000509258 H7C1W4 665 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 CTSWP56202 376 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 HUNKP57058 714 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 UBE3BQ7Z3V4 1068 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 USP48Q86UV5 1035 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
RNF4-212ENST00000509258 GREM2Q9H772 168 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
RNF4-212ENST00000509258 UFL1O94874 794 aa13.97□□□□□ -0.17
RNF4-212ENST00000509258 EGFRP00533 1210 aa13.97□□□□□ -0.17
RNF4-212ENST00000509258 DCPSQ96C86 337 aaKnown RBP13.97□□□□□ -0.17
RNF4-212ENST00000509258 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
RNF4-212ENST00000509258 ZNF609O15014 1411 aa13.97□□□□□ -0.17
RNF4-212ENST00000509258 G3V3G9 751 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 FKBP5Q13451 457 aaPredicted RBP13.96□□□□□ -0.17
RNF4-212ENST00000509258 GCKRQ14397 625 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 DLK2Q6UY11 383 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 DNAAF4Q8WXU2 420 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
RNF4-212ENST00000509258 ADM5C9JUS6 153 aa13.95□□□□□ -0.18
RNF4-212ENST00000509258 VIL1P09327 827 aaKnown RBP13.95□□□□□ -0.18
RNF4-212ENST00000509258 RGMBQ6NW40 437 aa13.95□□□□□ -0.18
RNF4-212ENST00000509258 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
RNF4-212ENST00000509258 C2orf69Q8N8R5 385 aa13.95□□□□□ -0.18
RNF4-212ENST00000509258 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
RNF4-212ENST00000509258 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
RNF4-212ENST00000509258 XDHP47989 1333 aa13.94□□□□□ -0.18
RNF4-212ENST00000509258 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
RNF4-212ENST00000509258 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
RNF4-212ENST00000509258 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
RNF4-212ENST00000509258 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
RNF4-212ENST00000509258 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 BEND3Q5T5X7 828 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 ANKRD18AQ8IVF6 992 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 AGBL3Q8NEM8 1001 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms