RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 DUOX1Q9NRD9 1551 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 G3V3G9 751 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 GRM8O00222 908 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 CSF1RP07333 972 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 DCAF8Q5TAQ9 597 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 LDHDQ86WU2 507 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 SMC4Q9NTJ3 1288 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 CLEC11AQ9Y240 323 aa30.85■■■□□ 2.53
PROM1-209ENST00000508940 RAD17O75943 681 aa30.84■■■□□ 2.53
PROM1-209ENST00000508940 ITGA6P23229 1130 aa30.84■■■□□ 2.53
PROM1-209ENST00000508940 XDHP47989 1333 aa30.83■■■□□ 2.53
PROM1-209ENST00000508940 POTEIP0CG38 1075 aa30.83■■■□□ 2.53
PROM1-209ENST00000508940 POTEJP0CG39 1038 aa30.83■■■□□ 2.53
PROM1-209ENST00000508940 FAM161AQ3B820 660 aa30.83■■■□□ 2.53
PROM1-209ENST00000508940 CHMP3Q9Y3E7 222 aa30.83■■■□□ 2.53
PROM1-209ENST00000508940 ATP2B4P23634 1241 aa30.82■■■□□ 2.52
PROM1-209ENST00000508940 GPR101Q96P66 508 aaPredicted RBP30.82■■■□□ 2.52
PROM1-209ENST00000508940 MPHOSPH8Q99549 860 aa30.82■■■□□ 2.52
PROM1-209ENST00000508940 DBNDD1Q9H9R9 158 aa30.82■■■□□ 2.52
PROM1-209ENST00000508940 ANKRD18BA2A2Z9 1011 aa30.81■■■□□ 2.52
PROM1-209ENST00000508940 DOK7Q18PE1 504 aa30.81■■■□□ 2.52
PROM1-209ENST00000508940 MINPP1Q9UNW1 487 aa30.81■■■□□ 2.52
PROM1-209ENST00000508940 YDJCA8MPS7 323 aa30.8■■■□□ 2.52
PROM1-209ENST00000508940 EPS15P42566 896 aa30.8■■■□□ 2.52
PROM1-209ENST00000508940 SCNN1DP51172 638 aa30.8■■■□□ 2.52
PROM1-209ENST00000508940 FOXO4P98177 505 aa30.8■■■□□ 2.52
PROM1-209ENST00000508940 ECE2O60344 883 aa30.79■■■□□ 2.52
PROM1-209ENST00000508940 IFIT5Q13325 482 aaKnown RBP30.79■■■□□ 2.52
PROM1-209ENST00000508940 GMPSP49915 693 aaPredicted RBP30.78■■■□□ 2.52
PROM1-209ENST00000508940 HNRNPUQ00839 825 aaKnown RBP eCLIP30.78■■■□□ 2.52
PROM1-209ENST00000508940 GPRC5DQ9NZD1 345 aa30.78■■■□□ 2.52
PROM1-209ENST00000508940 LTBP1Q14766 1721 aa30.78■■■□□ 2.52
PROM1-209ENST00000508940 LMBR1LQ6UX01 489 aa30.77■■■□□ 2.52
PROM1-209ENST00000508940 SPEF2Q9C093 1822 aa30.76■■■□□ 2.51
PROM1-209ENST00000508940 CCDC57Q2TAC2 916 aa30.75■■■□□ 2.51
PROM1-209ENST00000508940 USP50Q70EL3 339 aaPredicted RBP30.75■■■□□ 2.51
PROM1-209ENST00000508940 ANKRD2Q9GZV1 360 aa30.75■■■□□ 2.51
PROM1-209ENST00000508940 CCT4P50991 539 aaKnown RBP30.74■■■□□ 2.51
PROM1-209ENST00000508940 TAF7LQ5H9L4 462 aa30.74■■■□□ 2.51
PROM1-209ENST00000508940 EPHA10Q5JZY3 1008 aa30.74■■■□□ 2.51
PROM1-209ENST00000508940 ADARB2Q9NS39 739 aaKnown RBP30.74■■■□□ 2.51
PROM1-209ENST00000508940 PSMD14O00487 310 aa30.73■■■□□ 2.51
PROM1-209ENST00000508940 NBPF7P0C2Y1 421 aaPredicted RBP30.73■■■□□ 2.51
PROM1-209ENST00000508940 HTRA3P83110 453 aa30.73■■■□□ 2.51
PROM1-209ENST00000508940 LEMD3Q9Y2U8 911 aa30.73■■■□□ 2.51
PROM1-209ENST00000508940 NOB1Q9ULX3 412 aaKnown RBP30.72■■■□□ 2.51
PROM1-209ENST00000508940 H7C1D1 291 aa30.71■■■□□ 2.51
PROM1-209ENST00000508940 SUCLG2Q96I99 432 aa30.71■■■□□ 2.51
PROM1-209ENST00000508940 CNOT7Q9UIV1 285 aaKnown RBP30.71■■■□□ 2.51
PROM1-209ENST00000508940 UTYO14607 1347 aa30.71■■■□□ 2.51
PROM1-209ENST00000508940 KCNJ4P48050 445 aa30.7■■■□□ 2.51
PROM1-209ENST00000508940 MAP1SQ66K74 1059 aaPredicted RBP30.7■■■□□ 2.51
PROM1-209ENST00000508940 CNTROBQ8N137 903 aa30.7■■■□□ 2.51
PROM1-209ENST00000508940 KCNQ5Q9NR82 932 aa30.7■■■□□ 2.51
PROM1-209ENST00000508940 RARSP54136 660 aaKnown RBP30.69■■■□□ 2.5
PROM1-209ENST00000508940 BRPF1P55201 1214 aaPredicted RBP30.69■■■□□ 2.5
PROM1-209ENST00000508940 CHRNDQ07001 517 aa30.69■■■□□ 2.5
PROM1-209ENST00000508940 DPF2Q92785 391 aa30.69■■■□□ 2.5
PROM1-209ENST00000508940 API5Q9BZZ5 524 aaKnown RBP30.69■■■□□ 2.5
PROM1-209ENST00000508940 ZBTB12Q9Y330 459 aaPredicted RBP30.69■■■□□ 2.5
PROM1-209ENST00000508940 DNAJC5GQ8N7S2 189 aa30.68■■■□□ 2.5
PROM1-209ENST00000508940 ZNF804BA4D1E1 1349 aa30.68■■■□□ 2.5
PROM1-209ENST00000508940 MED23Q9ULK4 1368 aa30.67■■■□□ 2.5
PROM1-209ENST00000508940 WTIPA6NIX2 430 aaPredicted RBP30.67■■■□□ 2.5
PROM1-209ENST00000508940 RPS12P25398 132 aaKnown RBP30.67■■■□□ 2.5
PROM1-209ENST00000508940 LDHAL6AQ6ZMR3 332 aa30.67■■■□□ 2.5
PROM1-209ENST00000508940 PODNQ7Z5L7 613 aa30.67■■■□□ 2.5
PROM1-209ENST00000508940 MICALL2Q8IY33 904 aa30.67■■■□□ 2.5
PROM1-209ENST00000508940 ITGBL1O95965 494 aaPredicted RBP30.66■■■□□ 2.5
PROM1-209ENST00000508940 ZNF594Q96JF6 807 aaPredicted RBP30.66■■■□□ 2.5
PROM1-209ENST00000508940 CNNM1Q9NRU3 951 aa30.66■■■□□ 2.5
PROM1-209ENST00000508940 ADAMTSL1Q8N6G6 1762 aa30.66■■■□□ 2.5
PROM1-209ENST00000508940 VIL1P09327 827 aaKnown RBP30.65■■■□□ 2.5
PROM1-209ENST00000508940 KAZALD1Q96I82 304 aa30.65■■■□□ 2.5
PROM1-209ENST00000508940 USP44Q9H0E7 712 aa30.65■■■□□ 2.5
PROM1-209ENST00000508940 BICC1Q9H694 974 aaKnown RBP30.65■■■□□ 2.5
PROM1-209ENST00000508940 PASKQ96RG2 1323 aa30.65■■■□□ 2.5
PROM1-209ENST00000508940 HELBQ8NG08 1087 aaPredicted RBP30.64■■■□□ 2.5
PROM1-209ENST00000508940 KIF16BQ96L93 1317 aa30.64■■■□□ 2.5
PROM1-209ENST00000508940 KLRG1Q96E93 195 aa30.63■■■□□ 2.49
PROM1-209ENST00000508940 COA1Q9GZY4 146 aa30.63■■■□□ 2.49
PROM1-209ENST00000508940 CREBZFQ9NS37 354 aa30.63■■■□□ 2.49
PROM1-209ENST00000508940 USP17L3A6NCW0 530 aa30.62■■■□□ 2.49
PROM1-209ENST00000508940 USP17L4A6NCW7 530 aa30.62■■■□□ 2.49
PROM1-209ENST00000508940 TAF5LO75529 589 aa30.62■■■□□ 2.49
PROM1-209ENST00000508940 USP17L1Q7RTZ2 530 aa30.62■■■□□ 2.49
PROM1-209ENST00000508940 SHTN1A0MZ66 631 aa30.61■■■□□ 2.49
PROM1-209ENST00000508940 PLIN1O60240 522 aa30.61■■■□□ 2.49
PROM1-209ENST00000508940 RABL6Q3YEC7 729 aaPredicted RBP30.61■■■□□ 2.49
PROM1-209ENST00000508940 IPO8O15397 1037 aaKnown RBP30.6■■■□□ 2.49
PROM1-209ENST00000508940 SCN9AQ15858 1988 aa30.6■■■□□ 2.49
PROM1-209ENST00000508940 RSBN1LQ6PCB5 846 aaPredicted RBP30.6■■■□□ 2.49
PROM1-209ENST00000508940 AGBL3Q8NEM8 1001 aa30.6■■■□□ 2.49
PROM1-209ENST00000508940 TRPM4Q8TD43 1214 aa30.6■■■□□ 2.49
PROM1-209ENST00000508940 ARHGAP45Q92619 1136 aa30.6■■■□□ 2.49
PROM1-209ENST00000508940 TMEM88BA6NKF7 163 aa30.59■■■□□ 2.49
PROM1-209ENST00000508940 SAMD7Q7Z3H4 446 aa30.59■■■□□ 2.49
PROM1-209ENST00000508940 TXNRD3Q86VQ6 643 aa30.59■■■□□ 2.49
PROM1-209ENST00000508940 ZC3H15Q8WU90 426 aaKnown RBP30.59■■■□□ 2.49
PROM1-209ENST00000508940 FBXW7Q969H0 707 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms