RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
NUP54-207ENST00000508583 EYA3Q99504 573 aa11.42□□□□□ -0.58
NUP54-207ENST00000508583 MEIS3Q99687 375 aa11.42□□□□□ -0.58
NUP54-207ENST00000508583 RTFDC1Q9BY42 306 aaPredicted RBP11.42□□□□□ -0.58
NUP54-207ENST00000508583 ANKRD2Q9GZV1 360 aa11.42□□□□□ -0.58
NUP54-207ENST00000508583 NSFL1CQ9UNZ2 370 aaKnown RBP11.42□□□□□ -0.58
NUP54-207ENST00000508583 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
NUP54-207ENST00000508583 XDHP47989 1333 aa11.41□□□□□ -0.58
NUP54-207ENST00000508583 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
NUP54-207ENST00000508583 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
NUP54-207ENST00000508583 PODXL2Q9NZ53 605 aa11.41□□□□□ -0.58
NUP54-207ENST00000508583 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
NUP54-207ENST00000508583 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
NUP54-207ENST00000508583 ATP2B4P23634 1241 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 KCNJ4P48050 445 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 PRELPP51888 382 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
NUP54-207ENST00000508583 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
NUP54-207ENST00000508583 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
NUP54-207ENST00000508583 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
NUP54-207ENST00000508583 DICER1Q9UPY3 1922 aaKnown RBP11.4□□□□□ -0.58
NUP54-207ENST00000508583 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 KDM2BQ8NHM5 1336 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 C6orf229H3BNL8 230 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 RLBP1P12271 317 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 MINPP1Q9UNW1 487 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 LEMD3Q9Y2U8 911 aa11.39□□□□□ -0.59
NUP54-207ENST00000508583 G3V3G9 751 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 ZBTB7BO15156 539 aaPredicted RBP11.38□□□□□ -0.59
NUP54-207ENST00000508583 PLIN1O60240 522 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 UFL1O94874 794 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
NUP54-207ENST00000508583 GPSM2P81274 684 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 MTX1Q13505 466 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 WASHC4Q2M389 1173 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 ZC3H12CQ9C0D7 883 aaKnown RBP11.38□□□□□ -0.59
NUP54-207ENST00000508583 TNNQ9UQP3 1299 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
NUP54-207ENST00000508583 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
NUP54-207ENST00000508583 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
NUP54-207ENST00000508583 EIF6P56537 245 aaKnown RBP11.37□□□□□ -0.59
NUP54-207ENST00000508583 CHRNDQ07001 517 aa11.37□□□□□ -0.59
NUP54-207ENST00000508583 TBC1D16Q8TBP0 767 aa11.37□□□□□ -0.59
NUP54-207ENST00000508583 HMMRO75330 724 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 CIAO1O76071 339 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 AOC3Q16853 763 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 METTL24Q5JXM2 366 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 MED23Q9ULK4 1368 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 COL4A5P29400 1685 aa11.36□□□□□ -0.59
NUP54-207ENST00000508583 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
NUP54-207ENST00000508583 EYA2O00167 538 aa11.35□□□□□ -0.59
NUP54-207ENST00000508583 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
NUP54-207ENST00000508583 ZNF784Q8NCA9 323 aaPredicted RBP11.35□□□□□ -0.59
NUP54-207ENST00000508583 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
NUP54-207ENST00000508583 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
NUP54-207ENST00000508583 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
NUP54-207ENST00000508583 COPRSQ9NQ92 184 aa11.35□□□□□ -0.59
NUP54-207ENST00000508583 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
NUP54-207ENST00000508583 A0A1B0GUL6 1792 aa11.35□□□□□ -0.59
NUP54-207ENST00000508583 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 FZD9O00144 591 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
NUP54-207ENST00000508583 AAMPQ13685 434 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 TNIP1Q15025 636 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
NUP54-207ENST00000508583 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
NUP54-207ENST00000508583 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 RFX5P48382 616 aaPredicted RBP11.33□□□□□ -0.6
NUP54-207ENST00000508583 ATP8B2P98198 1209 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP54-207ENST00000508583 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
NUP54-207ENST00000508583 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 C15orf52Q6ZUT6 534 aaKnown RBP11.33□□□□□ -0.6
NUP54-207ENST00000508583 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 GPC2Q8N158 579 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
NUP54-207ENST00000508583 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
NUP54-207ENST00000508583 ECE2O60344 883 aa11.32□□□□□ -0.6
NUP54-207ENST00000508583 PDE8BO95263 885 aa11.32□□□□□ -0.6
NUP54-207ENST00000508583 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
NUP54-207ENST00000508583 SLC5A1P13866 664 aa11.32□□□□□ -0.6
NUP54-207ENST00000508583 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms