RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 EYA2O00167 538 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
HTT-204ENST00000508321 HSP90AB4PQ58FF6 505 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 PSMD1Q99460 953 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 ANKRD2Q9GZV1 360 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 IL15P40933 162 aaPredicted RBP12.72□□□□□ -0.37
HTT-204ENST00000508321 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
HTT-204ENST00000508321 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
HTT-204ENST00000508321 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
HTT-204ENST00000508321 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
HTT-204ENST00000508321 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
HTT-204ENST00000508321 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
HTT-204ENST00000508321 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 C21orf2O43822 256 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
HTT-204ENST00000508321 GPR162Q16538 588 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 ERC1Q8IUD2 1116 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
HTT-204ENST00000508321 VPS33BQ9H267 617 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
HTT-204ENST00000508321 SBF1O95248 1867 aa12.71□□□□□ -0.37
HTT-204ENST00000508321 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
HTT-204ENST00000508321 CHRNDQ07001 517 aa12.7□□□□□ -0.38
HTT-204ENST00000508321 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
HTT-204ENST00000508321 MPNDQ8N594 471 aa12.7□□□□□ -0.38
HTT-204ENST00000508321 ZNF594Q96JF6 807 aaPredicted RBP12.7□□□□□ -0.38
HTT-204ENST00000508321 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
HTT-204ENST00000508321 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
HTT-204ENST00000508321 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
HTT-204ENST00000508321 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
HTT-204ENST00000508321 METTL24Q5JXM2 366 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
HTT-204ENST00000508321 EYA3Q99504 573 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
HTT-204ENST00000508321 ZNF609O15014 1411 aa12.69□□□□□ -0.38
HTT-204ENST00000508321 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 PSME4Q14997 1843 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 SIRT2Q8IXJ6 389 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 SIL1Q9H173 461 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
HTT-204ENST00000508321 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 UTRNP46939 3433 aa12.68□□□□□ -0.38
HTT-204ENST00000508321 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
HTT-204ENST00000508321 UFL1O94874 794 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 PDE8BO95263 885 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 KCNJ4P48050 445 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 GPSM2P81274 684 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
HTT-204ENST00000508321 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
HTT-204ENST00000508321 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 AKAP2Q9Y2D5 859 aa12.67□□□□□ -0.38
HTT-204ENST00000508321 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 NFKBIEO00221 500 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 TBC1D16Q8TBP0 767 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
HTT-204ENST00000508321 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 GPR108Q9NPR9 543 aa12.66□□□□□ -0.38
HTT-204ENST00000508321 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
HTT-204ENST00000508321 IFIT1P09914 478 aaKnown RBP12.65□□□□□ -0.38
HTT-204ENST00000508321 SLC5A1P13866 664 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 LMNB1P20700 586 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 LPIN2Q92539 896 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
HTT-204ENST00000508321 C6orf229H3BNL8 230 aa12.64□□□□□ -0.39
HTT-204ENST00000508321 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
HTT-204ENST00000508321 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
HTT-204ENST00000508321 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
HTT-204ENST00000508321 ZBTB22O15209 634 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 SASH1O94885 1247 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 FGFR2P21802 821 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 RHPN1Q8TCX5 695 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms