RNA–Protein interactions for RNA: ENST00000508183.5

SH3TC1-214, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 1,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-214ENST00000508183 ZNF541Q9H0D2 1346 aa23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 GNAI3P08754 354 aa23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 GRAPQ13588 217 aa23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 LARGE2Q8N3Y3 721 aa23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 GRAPLQ8TC17 118 aaPredicted RBP23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 CELF1Q92879 486 aaKnown RBP23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 L3MBTL3Q96JM7 780 aaPredicted RBP23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 LRRFIP2Q9Y608 721 aaKnown RBP23.46■■□□□ 1.35
SH3TC1-214ENST00000508183 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
SH3TC1-214ENST00000508183 FZD9O00144 591 aa23.44■■□□□ 1.34
SH3TC1-214ENST00000508183 EIF6P56537 245 aaKnown RBP23.44■■□□□ 1.34
SH3TC1-214ENST00000508183 TMC4Q7Z404 712 aa23.44■■□□□ 1.34
SH3TC1-214ENST00000508183 ITGA6P23229 1130 aa23.43■■□□□ 1.34
SH3TC1-214ENST00000508183 DPP8Q6V1X1 898 aaPredicted RBP23.43■■□□□ 1.34
SH3TC1-214ENST00000508183 SP8Q8IXZ3 490 aa23.43■■□□□ 1.34
SH3TC1-214ENST00000508183 PPIP5K2O43314 1243 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 NIM1KQ8IY84 436 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 GPC2Q8N158 579 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 SPEF2Q9C093 1822 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 LRRC37AA6NMS7 1700 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 MPNDQ8N594 471 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 VPS33BQ9H267 617 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 C1orf115Q9H7X2 142 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 CHMP3Q9Y3E7 222 aa23.42■■□□□ 1.34
SH3TC1-214ENST00000508183 GNAI2P04899 355 aa23.41■■□□□ 1.34
SH3TC1-214ENST00000508183 HACL1Q9UJ83 578 aa23.41■■□□□ 1.34
SH3TC1-214ENST00000508183 RPS8P62241 208 aaKnown RBP23.4■■□□□ 1.34
SH3TC1-214ENST00000508183 CHADLQ6NUI6 762 aa23.4■■□□□ 1.34
SH3TC1-214ENST00000508183 TAF1DQ9H5J8 278 aaPredicted RBP23.4■■□□□ 1.34
SH3TC1-214ENST00000508183 GJA3Q9Y6H8 435 aa23.4■■□□□ 1.34
SH3TC1-214ENST00000508183 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 AOC3Q16853 763 aa23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 CDC5LQ99459 802 aaKnown RBP23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 RTFDC1Q9BY42 306 aaPredicted RBP23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 ZBTB40Q9NUA8 1239 aa23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.33
SH3TC1-214ENST00000508183 SCN4AP35499 1836 aa23.38■■□□□ 1.33
SH3TC1-214ENST00000508183 ANKRD18BA2A2Z9 1011 aa23.38■■□□□ 1.33
SH3TC1-214ENST00000508183 LDHDQ86WU2 507 aa23.38■■□□□ 1.33
SH3TC1-214ENST00000508183 ANKRD18AQ8IVF6 992 aa23.38■■□□□ 1.33
SH3TC1-214ENST00000508183 LMOD1P29536 600 aaPredicted RBP23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 RFX5P48382 616 aaPredicted RBP23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 HTRA3P83110 453 aa23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 MTX1Q13505 466 aa23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 EAPPQ56P03 285 aaPredicted RBP23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 ZNF594Q96JF6 807 aaPredicted RBP23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 COL4A5P29400 1685 aa23.37■■□□□ 1.33
SH3TC1-214ENST00000508183 EPHX2P34913 555 aa23.36■■□□□ 1.33
SH3TC1-214ENST00000508183 CCDC57Q2TAC2 916 aa23.36■■□□□ 1.33
SH3TC1-214ENST00000508183 PNMA8AQ86V59 439 aaPredicted RBP23.36■■□□□ 1.33
SH3TC1-214ENST00000508183 CRBNQ96SW2 442 aa23.36■■□□□ 1.33
SH3TC1-214ENST00000508183 LTBP1Q14766 1721 aa23.36■■□□□ 1.33
SH3TC1-214ENST00000508183 POTEIP0CG38 1075 aa23.35■■□□□ 1.33
SH3TC1-214ENST00000508183 POTEJP0CG39 1038 aa23.35■■□□□ 1.33
SH3TC1-214ENST00000508183 DNAJC5GQ8N7S2 189 aa23.35■■□□□ 1.33
SH3TC1-214ENST00000508183 DUOX1Q9NRD9 1551 aa23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 BSDC1Q9NW68 430 aaPredicted RBP23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 ZNRF3Q9ULT6 936 aa23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 CLEC11AQ9Y240 323 aa23.34■■□□□ 1.33
SH3TC1-214ENST00000508183 PNMA6EA0A0J9YXQ4 647 aa23.33■■□□□ 1.33
SH3TC1-214ENST00000508183 IGHMBP2P38935 993 aaKnown RBP23.33■■□□□ 1.33
SH3TC1-214ENST00000508183 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
SH3TC1-214ENST00000508183 KLRG1Q96E93 195 aa23.33■■□□□ 1.32
SH3TC1-214ENST00000508183 A0A1B0GUL6 1792 aa23.32■■□□□ 1.32
SH3TC1-214ENST00000508183 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
SH3TC1-214ENST00000508183 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
SH3TC1-214ENST00000508183 CEP85Q6P2H3 762 aa23.32■■□□□ 1.32
SH3TC1-214ENST00000508183 PUS3Q9BZE2 481 aaKnown RBP23.32■■□□□ 1.32
SH3TC1-214ENST00000508183 MPHOSPH8Q99549 860 aa23.31■■□□□ 1.32
SH3TC1-214ENST00000508183 MINPP1Q9UNW1 487 aa23.31■■□□□ 1.32
SH3TC1-214ENST00000508183 C6orf229H3BNL8 230 aa23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 GPSM2P81274 684 aa23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 ATP8B2P98198 1209 aa23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 WASHC4Q2M389 1173 aa23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 TAF7LQ5H9L4 462 aa23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 CHMP4BQ9H444 224 aaKnown RBP23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 PA2G4Q9UQ80 394 aaKnown RBP23.3■■□□□ 1.32
SH3TC1-214ENST00000508183 SCNN1DP51172 638 aa23.29■■□□□ 1.32
SH3TC1-214ENST00000508183 POLA2Q14181 598 aa23.29■■□□□ 1.32
SH3TC1-214ENST00000508183 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
SH3TC1-214ENST00000508183 CENPBP07199 599 aaPredicted RBP23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 IRX6P78412 446 aaPredicted RBP23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 CXCL9Q07325 125 aa23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 LRRC24Q50LG9 513 aa23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 SIRT2Q8IXJ6 389 aa23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 SSH3Q8TE77 659 aa23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 EYA3Q99504 573 aa23.28■■□□□ 1.32
SH3TC1-214ENST00000508183 TNIP1Q15025 636 aa23.27■■□□□ 1.32
SH3TC1-214ENST00000508183 CIAPIN1Q6FI81 312 aa23.27■■□□□ 1.32
SH3TC1-214ENST00000508183 COPRSQ9NQ92 184 aa23.27■■□□□ 1.32
SH3TC1-214ENST00000508183 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.32
SH3TC1-214ENST00000508183 RIPOR2Q9Y4F9 1068 aa23.27■■□□□ 1.32
SH3TC1-214ENST00000508183 WTIPA6NIX2 430 aaPredicted RBP23.26■■□□□ 1.31
SH3TC1-214ENST00000508183 EPS15P42566 896 aa23.26■■□□□ 1.31
SH3TC1-214ENST00000508183 CHRNDQ07001 517 aa23.26■■□□□ 1.31
SH3TC1-214ENST00000508183 EXOC6Q8TAG9 804 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms