RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 PDIA6Q15084 440 aa11.88□□□□□ -0.51
COPS4-205ENST00000507376 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
COPS4-205ENST00000507376 MPNDQ8N594 471 aa11.88□□□□□ -0.51
COPS4-205ENST00000507376 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
COPS4-205ENST00000507376 SAGE1Q9NXZ1 904 aa11.88□□□□□ -0.51
COPS4-205ENST00000507376 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
COPS4-205ENST00000507376 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
COPS4-205ENST00000507376 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
COPS4-205ENST00000507376 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
COPS4-205ENST00000507376 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
COPS4-205ENST00000507376 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
COPS4-205ENST00000507376 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
COPS4-205ENST00000507376 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
COPS4-205ENST00000507376 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
COPS4-205ENST00000507376 CELF1Q92879 486 aaKnown RBP11.86□□□□□ -0.51
COPS4-205ENST00000507376 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
COPS4-205ENST00000507376 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
COPS4-205ENST00000507376 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
COPS4-205ENST00000507376 BRCA2P51587 3418 aa11.86□□□□□ -0.51
COPS4-205ENST00000507376 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
COPS4-205ENST00000507376 ECE2O60344 883 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 GPSM2P81274 684 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 SP8Q8IXZ3 490 aa11.85□□□□□ -0.51
COPS4-205ENST00000507376 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
COPS4-205ENST00000507376 H7C1D1 291 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 GABBR2O75899 941 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 GRAPQ13588 217 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 TNIP1Q15025 636 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 SUPT20HQ8NEM7 779 aa11.84□□□□□ -0.51
COPS4-205ENST00000507376 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
COPS4-205ENST00000507376 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
COPS4-205ENST00000507376 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
COPS4-205ENST00000507376 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
COPS4-205ENST00000507376 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
COPS4-205ENST00000507376 CENPFP49454 3210 aa11.83□□□□□ -0.52
COPS4-205ENST00000507376 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
COPS4-205ENST00000507376 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
COPS4-205ENST00000507376 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
COPS4-205ENST00000507376 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
COPS4-205ENST00000507376 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
COPS4-205ENST00000507376 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
COPS4-205ENST00000507376 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
COPS4-205ENST00000507376 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
COPS4-205ENST00000507376 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 CAP1Q01518 475 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
COPS4-205ENST00000507376 DPF2Q92785 391 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
COPS4-205ENST00000507376 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 VPS33BQ9H267 617 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
COPS4-205ENST00000507376 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
COPS4-205ENST00000507376 TRIOBPQ9H2D6 2365 aa11.81□□□□□ -0.52
COPS4-205ENST00000507376 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 BBOX1O75936 387 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 COPS6Q7L5N1 327 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
COPS4-205ENST00000507376 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
COPS4-205ENST00000507376 SCARF1Q14162 830 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
COPS4-205ENST00000507376 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
COPS4-205ENST00000507376 CEP290O15078 2479 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
COPS4-205ENST00000507376 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
COPS4-205ENST00000507376 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
COPS4-205ENST00000507376 SZT2Q5T011 3432 aa11.77□□□□□ -0.52
COPS4-205ENST00000507376 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
COPS4-205ENST00000507376 GPR25O00155 361 aa11.77□□□□□ -0.53
COPS4-205ENST00000507376 PRKG1Q13976 671 aa11.77□□□□□ -0.53
COPS4-205ENST00000507376 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
COPS4-205ENST00000507376 JARID2Q92833 1246 aaPredicted RBP11.77□□□□□ -0.53
COPS4-205ENST00000507376 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
COPS4-205ENST00000507376 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
COPS4-205ENST00000507376 LAMB1P07942 1786 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms