RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 HIRAP54198 1017 aaPredicted RBP16.53■□□□□ 0.24
SNHG4-204ENST00000507197 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
SNHG4-204ENST00000507197 TRPM4Q8TD43 1214 aa16.53■□□□□ 0.24
SNHG4-204ENST00000507197 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
SNHG4-204ENST00000507197 GGA1Q9UJY5 639 aa16.53■□□□□ 0.24
SNHG4-204ENST00000507197 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
SNHG4-204ENST00000507197 UFL1O94874 794 aa16.52■□□□□ 0.24
SNHG4-204ENST00000507197 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
SNHG4-204ENST00000507197 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
SNHG4-204ENST00000507197 CA12O43570 354 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 DOK7Q18PE1 504 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
SNHG4-204ENST00000507197 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
SNHG4-204ENST00000507197 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
SNHG4-204ENST00000507197 THSD7BQ9C0I4 1608 aa16.5■□□□□ 0.23
SNHG4-204ENST00000507197 KSR2Q6VAB6 950 aa16.5■□□□□ 0.23
SNHG4-204ENST00000507197 SAMD7Q7Z3H4 446 aa16.5■□□□□ 0.23
SNHG4-204ENST00000507197 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
SNHG4-204ENST00000507197 XDHP47989 1333 aa16.49■□□□□ 0.23
SNHG4-204ENST00000507197 TBC1D10BQ4KMP7 808 aaPredicted RBP16.49■□□□□ 0.23
SNHG4-204ENST00000507197 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
SNHG4-204ENST00000507197 USP48Q86UV5 1035 aa16.49■□□□□ 0.23
SNHG4-204ENST00000507197 TAF1P21675 1872 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 SHTN1A0MZ66 631 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
SNHG4-204ENST00000507197 ATP2B4P23634 1241 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
SNHG4-204ENST00000507197 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
SNHG4-204ENST00000507197 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 RTL9Q8NET4 1388 aa16.48■□□□□ 0.23
SNHG4-204ENST00000507197 IL16Q14005 1332 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 AOC2O75106 756 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 CTSWP56202 376 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 HUNKP57058 714 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 NOGQ13253 232 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 KIF4BQ2VIQ3 1234 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
SNHG4-204ENST00000507197 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
SNHG4-204ENST00000507197 SULF1Q8IWU6 871 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
SNHG4-204ENST00000507197 CCDC85AQ96PX6 553 aaPredicted RBP16.47■□□□□ 0.23
SNHG4-204ENST00000507197 PODNQ7Z5L7 613 aa16.46■□□□□ 0.23
SNHG4-204ENST00000507197 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
SNHG4-204ENST00000507197 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
SNHG4-204ENST00000507197 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
SNHG4-204ENST00000507197 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
SNHG4-204ENST00000507197 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
SNHG4-204ENST00000507197 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
SNHG4-204ENST00000507197 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
SNHG4-204ENST00000507197 BSDC1Q9NW68 430 aaPredicted RBP16.45■□□□□ 0.22
SNHG4-204ENST00000507197 ZNF609O15014 1411 aa16.45■□□□□ 0.22
SNHG4-204ENST00000507197 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
SNHG4-204ENST00000507197 ZNF280AP59817 542 aaPredicted RBP16.44■□□□□ 0.22
SNHG4-204ENST00000507197 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
SNHG4-204ENST00000507197 COL4A1P02462 1669 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 USP17L3A6NCW0 530 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 USP17L4A6NCW7 530 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 EGFRP00533 1210 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SNHG4-204ENST00000507197 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 USP17L1Q7RTZ2 530 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 ABHD8Q96I13 439 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 GGA3Q9NZ52 723 aa16.43■□□□□ 0.22
SNHG4-204ENST00000507197 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
SNHG4-204ENST00000507197 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
SNHG4-204ENST00000507197 GREM2Q9H772 168 aa16.42■□□□□ 0.22
SNHG4-204ENST00000507197 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
SNHG4-204ENST00000507197 MINPP1Q9UNW1 487 aa16.42■□□□□ 0.22
SNHG4-204ENST00000507197 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 H7C1W4 665 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 MMP14P50281 582 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 FLIIQ13045 1269 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 UBE3BQ7Z3V4 1068 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 LEMD3Q9Y2U8 911 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
SNHG4-204ENST00000507197 ANP32CO43423 234 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
SNHG4-204ENST00000507197 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
SNHG4-204ENST00000507197 ZNF157P51786 506 aaPredicted RBP16.4■□□□□ 0.22
SNHG4-204ENST00000507197 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
SNHG4-204ENST00000507197 SCARF1Q14162 830 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 GCKRQ14397 625 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 ANGEL2Q5VTE6 544 aaKnown RBP16.4■□□□□ 0.22
SNHG4-204ENST00000507197 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
SNHG4-204ENST00000507197 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms