RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CLCN3-205ENST00000506924 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
CLCN3-205ENST00000506924 PTK2Q05397 1052 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 ZNF511Q8NB15 262 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-205ENST00000506924 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
CLCN3-205ENST00000506924 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 SLC19A1P41440 591 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 ABL2P42684 1182 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 IRF5Q13568 498 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 CCDC146Q8IYE0 955 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 GAS2L2Q8NHY3 880 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
CLCN3-205ENST00000506924 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-205ENST00000506924 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
CLCN3-205ENST00000506924 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLCN3-205ENST00000506924 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 BPHLQ86WA6 291 aaPredicted RBP12.54□□□□□ -0.4
CLCN3-205ENST00000506924 BAP1Q92560 729 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
CLCN3-205ENST00000506924 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 NEFMP07197 916 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 MCM10Q7L590 875 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
CLCN3-205ENST00000506924 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 LY75O60449 1722 aa12.53□□□□□ -0.4
CLCN3-205ENST00000506924 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
CLCN3-205ENST00000506924 NR1H3Q13133 447 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-205ENST00000506924 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-205ENST00000506924 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-205ENST00000506924 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.41
CLCN3-205ENST00000506924 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 TRAK2O60296 914 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 SOX11P35716 441 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 SIK1P57059 783 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 MCCD1P59942 119 aaPredicted RBP12.51□□□□□ -0.41
CLCN3-205ENST00000506924 SH3BP2P78314 561 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
CLCN3-205ENST00000506924 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
CLCN3-205ENST00000506924 TEFQ10587 303 aa12.5□□□□□ -0.41
CLCN3-205ENST00000506924 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
CLCN3-205ENST00000506924 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
CLCN3-205ENST00000506924 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
CLCN3-205ENST00000506924 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
CLCN3-205ENST00000506924 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
CLCN3-205ENST00000506924 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
CLCN3-205ENST00000506924 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 ITPK1Q13572 414 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
CLCN3-205ENST00000506924 SLC4A9Q96Q91 983 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 ARHGAP9Q9BRR9 750 aa12.49□□□□□ -0.41
CLCN3-205ENST00000506924 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 C5P01031 1676 aa12.48□□□□□ -0.41
CLCN3-205ENST00000506924 MRC1P22897 1456 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 KCNQ3O43525 872 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 VARSP26640 1264 aaKnown RBP12.47□□□□□ -0.41
CLCN3-205ENST00000506924 RIPK4P57078 832 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 SKOR1P84550 965 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 RUNDC1Q96C34 613 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
CLCN3-205ENST00000506924 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
CLCN3-205ENST00000506924 ZBTB7AO95365 584 aa12.46□□□□□ -0.41
CLCN3-205ENST00000506924 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
CLCN3-205ENST00000506924 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
CLCN3-205ENST00000506924 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 WNT7AO00755 349 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 ZBTB33Q86T24 672 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
CLCN3-205ENST00000506924 TTC5Q8N0Z6 440 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 MPNDQ8N594 471 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CLCN3-205ENST00000506924 OCSTAMPQ9BR26 566 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms