RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 MINPP1Q9UNW1 487 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 LRP5O75197 1615 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
ITGA3-209ENST00000506827 ATG9AQ7Z3C6 839 aa18.28■□□□□ 0.52
ITGA3-209ENST00000506827 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
ITGA3-209ENST00000506827 PUS3Q9BZE2 481 aaKnown RBP18.28■□□□□ 0.52
ITGA3-209ENST00000506827 IGHDP01880 384 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 CHRNDQ07001 517 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 SMC5Q8IY18 1101 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 RTKN2Q8IZC4 609 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 C7orf43Q8WVR3 580 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 AKAP2Q9Y2D5 859 aa18.27■□□□□ 0.52
ITGA3-209ENST00000506827 XDHP47989 1333 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 MYH3P11055 1940 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
ITGA3-209ENST00000506827 LRRCC1Q9C099 1032 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 BCS1LQ9Y276 419 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 LEMD3Q9Y2U8 911 aa18.26■□□□□ 0.51
ITGA3-209ENST00000506827 PDE8BO95263 885 aa18.25■□□□□ 0.51
ITGA3-209ENST00000506827 MPNDQ8N594 471 aa18.25■□□□□ 0.51
ITGA3-209ENST00000506827 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
ITGA3-209ENST00000506827 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
ITGA3-209ENST00000506827 NSFL1CQ9UNZ2 370 aaKnown RBP18.25■□□□□ 0.51
ITGA3-209ENST00000506827 C21orf2O43822 256 aa18.24■□□□□ 0.51
ITGA3-209ENST00000506827 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
ITGA3-209ENST00000506827 UBE4AQ14139 1066 aa18.24■□□□□ 0.51
ITGA3-209ENST00000506827 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
ITGA3-209ENST00000506827 SASH1O94885 1247 aa18.23■□□□□ 0.51
ITGA3-209ENST00000506827 KCNJ4P48050 445 aa18.23■□□□□ 0.51
ITGA3-209ENST00000506827 TFCP2Q12800 502 aa18.23■□□□□ 0.51
ITGA3-209ENST00000506827 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
ITGA3-209ENST00000506827 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
ITGA3-209ENST00000506827 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
ITGA3-209ENST00000506827 GGA1Q9UJY5 639 aa18.23■□□□□ 0.51
ITGA3-209ENST00000506827 GPSM2P81274 684 aa18.22■□□□□ 0.51
ITGA3-209ENST00000506827 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
ITGA3-209ENST00000506827 LPIN2Q92539 896 aa18.22■□□□□ 0.51
ITGA3-209ENST00000506827 VPS33BQ9H267 617 aa18.22■□□□□ 0.51
ITGA3-209ENST00000506827 COL11A2P13942 1736 aaPredicted RBP18.21■□□□□ 0.51
ITGA3-209ENST00000506827 IFIT1P09914 478 aaKnown RBP18.21■□□□□ 0.51
ITGA3-209ENST00000506827 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
ITGA3-209ENST00000506827 PSMD1Q99460 953 aa18.21■□□□□ 0.51
ITGA3-209ENST00000506827 EYA3Q99504 573 aa18.21■□□□□ 0.51
ITGA3-209ENST00000506827 RTFDC1Q9BY42 306 aaPredicted RBP18.21■□□□□ 0.51
ITGA3-209ENST00000506827 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
ITGA3-209ENST00000506827 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
ITGA3-209ENST00000506827 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
ITGA3-209ENST00000506827 APBB1O00213 710 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 TAF5LO75529 589 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 SLC5A1P13866 664 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 ATP2B3Q16720 1220 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
ITGA3-209ENST00000506827 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
ITGA3-209ENST00000506827 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 UFL1O94874 794 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 NUCB1Q02818 461 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 TNNI3KQ59H18 835 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
ITGA3-209ENST00000506827 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 KIAA1551Q9HCM1 1747 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 FPGT-TNNI3KV9GXZ4 949 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 DLEC1Q9Y238 1755 aa18.19■□□□□ 0.5
ITGA3-209ENST00000506827 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
ITGA3-209ENST00000506827 FGFR2P21802 821 aa18.18■□□□□ 0.5
ITGA3-209ENST00000506827 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
ITGA3-209ENST00000506827 CHD1LQ86WJ1 897 aa18.18■□□□□ 0.5
ITGA3-209ENST00000506827 LTBP3Q9NS15 1303 aa18.18■□□□□ 0.5
ITGA3-209ENST00000506827 A0A1B0GUL7 405 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 GPR162Q16538 588 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 NEUROD6Q96NK8 337 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 ZC3H12CQ9C0D7 883 aaKnown RBP18.17■□□□□ 0.5
ITGA3-209ENST00000506827 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 WWC3Q9ULE0 1092 aa18.17■□□□□ 0.5
ITGA3-209ENST00000506827 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
ITGA3-209ENST00000506827 GORABQ5T7V8 394 aa18.16■□□□□ 0.5
ITGA3-209ENST00000506827 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
ITGA3-209ENST00000506827 AACSQ86V21 672 aa18.16■□□□□ 0.5
ITGA3-209ENST00000506827 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
ITGA3-209ENST00000506827 EAF2Q96CJ1 260 aaPredicted RBP18.16■□□□□ 0.5
ITGA3-209ENST00000506827 TIMM10P62072 90 aa18.15■□□□□ 0.5
ITGA3-209ENST00000506827 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
ITGA3-209ENST00000506827 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
ITGA3-209ENST00000506827 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
ITGA3-209ENST00000506827 COL4A1P02462 1669 aa18.15■□□□□ 0.5
ITGA3-209ENST00000506827 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
ITGA3-209ENST00000506827 SLX4Q8IY92 1834 aa18.14■□□□□ 0.5
ITGA3-209ENST00000506827 SMARCA5O60264 1052 aaPredicted RBP18.14■□□□□ 0.49
ITGA3-209ENST00000506827 CCDC158Q5M9N0 1113 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms