RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PSMD1Q99460 953 aa17.29■□□□□ 0.36
SERF1B-204ENST00000506542 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
SERF1B-204ENST00000506542 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
SERF1B-204ENST00000506542 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
SERF1B-204ENST00000506542 MPNDQ8N594 471 aa17.28■□□□□ 0.36
SERF1B-204ENST00000506542 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
SERF1B-204ENST00000506542 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
SERF1B-204ENST00000506542 ALDH1L1O75891 902 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 RRAGCQ9HB90 399 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 NSFL1CQ9UNZ2 370 aaKnown RBP17.27■□□□□ 0.36
SERF1B-204ENST00000506542 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
SERF1B-204ENST00000506542 KIF3CO14782 793 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
SERF1B-204ENST00000506542 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
SERF1B-204ENST00000506542 ANKRD44Q8N8A2 993 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 GNAI2P04899 355 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 ITGA6P23229 1130 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 CC2D2BQ6DHV5 1058 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
SERF1B-204ENST00000506542 GLTPD2A6NH11 291 aa17.25■□□□□ 0.35
SERF1B-204ENST00000506542 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
SERF1B-204ENST00000506542 CSF1RP07333 972 aa17.25■□□□□ 0.35
SERF1B-204ENST00000506542 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
SERF1B-204ENST00000506542 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
SERF1B-204ENST00000506542 ZNF594Q96JF6 807 aaPredicted RBP17.25■□□□□ 0.35
SERF1B-204ENST00000506542 RIMBP2O15034 1052 aa17.24■□□□□ 0.35
SERF1B-204ENST00000506542 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
SERF1B-204ENST00000506542 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
SERF1B-204ENST00000506542 POTECB2RU33 542 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
SERF1B-204ENST00000506542 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
SERF1B-204ENST00000506542 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
SERF1B-204ENST00000506542 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
SERF1B-204ENST00000506542 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 C6orf229H3BNL8 230 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
SERF1B-204ENST00000506542 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
SERF1B-204ENST00000506542 UTYO14607 1347 aa17.22■□□□□ 0.35
SERF1B-204ENST00000506542 SNAP23O00161 211 aa17.22■□□□□ 0.35
SERF1B-204ENST00000506542 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
SERF1B-204ENST00000506542 FZD9O00144 591 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 UFL1O94874 794 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 KCNQ5Q9NR82 932 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
SERF1B-204ENST00000506542 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
SERF1B-204ENST00000506542 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
SERF1B-204ENST00000506542 HMMRO75330 724 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 DOK7Q18PE1 504 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 TMC4Q7Z404 712 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
SERF1B-204ENST00000506542 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 RGS3P49796 1198 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 WASHC4Q2M389 1173 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 TSHZ2Q9NRE2 1034 aa17.2■□□□□ 0.34
SERF1B-204ENST00000506542 BSDC1Q9NW68 430 aaPredicted RBP17.2■□□□□ 0.34
SERF1B-204ENST00000506542 ANKRD18BA2A2Z9 1011 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 RAD17O75943 681 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 KLRK1P26718 216 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
SERF1B-204ENST00000506542 NUCB1Q02818 461 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
SERF1B-204ENST00000506542 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
SERF1B-204ENST00000506542 PUS3Q9BZE2 481 aaKnown RBP17.19■□□□□ 0.34
SERF1B-204ENST00000506542 TAF5LO75529 589 aa17.18■□□□□ 0.34
SERF1B-204ENST00000506542 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
SERF1B-204ENST00000506542 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
SERF1B-204ENST00000506542 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
SERF1B-204ENST00000506542 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
SERF1B-204ENST00000506542 CXCL9Q07325 125 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 XDHP47989 1333 aa17.17■□□□□ 0.34
SERF1B-204ENST00000506542 CHRNDQ07001 517 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 PNMA6EA0A0J9YXQ4 647 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms