RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 H7C1W4 665 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 RARSP54136 660 aaKnown RBP9.2□□□□□ -0.94
GYPB-206ENST00000506516 GCKRQ14397 625 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
GYPB-206ENST00000506516 GRIPAP1Q4V328 841 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 BEND3Q5T5X7 828 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
GYPB-206ENST00000506516 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 ALDH1L1O75891 902 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 CCDC152Q4G0S7 254 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 C7orf43Q8WVR3 580 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 TMEM121BQ9BXQ6 578 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 C9orf78Q9NZ63 289 aaPredicted RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 NOB1Q9ULX3 412 aaKnown RBP9.19□□□□□ -0.94
GYPB-206ENST00000506516 CDHR2Q9BYE9 1310 aa9.19□□□□□ -0.94
GYPB-206ENST00000506516 LMNB1P20700 586 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 GRAPQ13588 217 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 UBE3BQ7Z3V4 1068 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 SP8Q8IXZ3 490 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 GRAPLQ8TC17 118 aaPredicted RBP9.18□□□□□ -0.94
GYPB-206ENST00000506516 ARHGAP45Q92619 1136 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 API5Q9BZZ5 524 aaKnown RBP9.18□□□□□ -0.94
GYPB-206ENST00000506516 KIAA1551Q9HCM1 1747 aa9.18□□□□□ -0.94
GYPB-206ENST00000506516 ABCC4O15439 1325 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
GYPB-206ENST00000506516 RPS8P62241 208 aaKnown RBP9.17□□□□□ -0.94
GYPB-206ENST00000506516 C9orf131Q5VYM1 1079 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 RNF181Q9P0P0 153 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 ATP6V0A2Q9Y487 856 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 ANKRD31Q8N7Z5 1873 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
GYPB-206ENST00000506516 KIF16BQ96L93 1317 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 LTBP3Q9NS15 1303 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 NFKBIEO00221 500 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 GRM8O00222 908 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 CTSWP56202 376 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
GYPB-206ENST00000506516 RASSF7Q02833 373 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
GYPB-206ENST00000506516 CDC5LQ99459 802 aaKnown RBP9.16□□□□□ -0.94
GYPB-206ENST00000506516 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
GYPB-206ENST00000506516 BCAR3O75815 825 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 CSF1RP07333 972 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 CASP7P55210 303 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 ANKRD18AQ8IVF6 992 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 MPNDQ8N594 471 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 CELF1Q92879 486 aaKnown RBP9.15□□□□□ -0.94
GYPB-206ENST00000506516 CCDC85AQ96PX6 553 aaPredicted RBP9.15□□□□□ -0.94
GYPB-206ENST00000506516 PSMD1Q99460 953 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 VPS33BQ9H267 617 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
GYPB-206ENST00000506516 CACNA1FO60840 1977 aa9.15□□□□□ -0.95
GYPB-206ENST00000506516 DLEC1Q9Y238 1755 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 ZC3H4Q9UPT8 1303 aaKnown RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 ANKRD18BA2A2Z9 1011 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 IGHMBP2P38935 993 aaKnown RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 OLFM4Q6UX06 510 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 DPP8Q6V1X1 898 aaPredicted RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 ATF7IPQ6VMQ6 1270 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 GREM2Q9H772 168 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 SEC31BQ9NQW1 1179 aa9.14□□□□□ -0.95
GYPB-206ENST00000506516 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 BRCA1P38398 1863 aaKnown RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 COL11A2P13942 1736 aaPredicted RBP9.14□□□□□ -0.95
GYPB-206ENST00000506516 ARFGEF1Q9Y6D6 1849 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 NBPF7P0C2Y1 421 aaPredicted RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 PRKCSHP14314 528 aaPredicted RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 ITGA6P23229 1130 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 IARSP41252 1262 aaKnown RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 IFIT5Q13325 482 aaKnown RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 CCDC57Q2TAC2 916 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 LMBR1LQ6UX01 489 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 JDP2Q8WYK2 163 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 MPHOSPH8Q99549 860 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 GPBP1L1Q9HC44 474 aaPredicted RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 ZNF277Q9NRM2 450 aaPredicted RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
GYPB-206ENST00000506516 TNRC6CQ9HCJ0 1690 aaKnown RBP9.13□□□□□ -0.95
GYPB-206ENST00000506516 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms