RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
RCN1-202ENST00000506388 CNNM1Q9NRU3 951 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
RCN1-202ENST00000506388 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
RCN1-202ENST00000506388 MINPP1Q9UNW1 487 aa16.49■□□□□ 0.23
RCN1-202ENST00000506388 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
RCN1-202ENST00000506388 PDE8BO95263 885 aa16.48■□□□□ 0.23
RCN1-202ENST00000506388 DPEP1P16444 411 aa16.48■□□□□ 0.23
RCN1-202ENST00000506388 CHRNA5P30532 468 aa16.48■□□□□ 0.23
RCN1-202ENST00000506388 ANKRD2Q9GZV1 360 aa16.48■□□□□ 0.23
RCN1-202ENST00000506388 SIL1Q9H173 461 aa16.48■□□□□ 0.23
RCN1-202ENST00000506388 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
RCN1-202ENST00000506388 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 CEP126Q9P2H0 1117 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 ARAP2Q8WZ64 1704 aa16.47■□□□□ 0.23
RCN1-202ENST00000506388 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.23
RCN1-202ENST00000506388 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
RCN1-202ENST00000506388 ZBTB22O15209 634 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 CHRNDQ07001 517 aa16.46■□□□□ 0.23
RCN1-202ENST00000506388 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
RCN1-202ENST00000506388 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
RCN1-202ENST00000506388 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
RCN1-202ENST00000506388 TFCP2Q12800 502 aa16.45■□□□□ 0.22
RCN1-202ENST00000506388 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
RCN1-202ENST00000506388 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
RCN1-202ENST00000506388 XDHP47989 1333 aa16.44■□□□□ 0.22
RCN1-202ENST00000506388 FGFR2P21802 821 aa16.44■□□□□ 0.22
RCN1-202ENST00000506388 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
RCN1-202ENST00000506388 SOGA3Q5TF21 947 aa16.44■□□□□ 0.22
RCN1-202ENST00000506388 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
RCN1-202ENST00000506388 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
RCN1-202ENST00000506388 ZNF609O15014 1411 aa16.43■□□□□ 0.22
RCN1-202ENST00000506388 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
RCN1-202ENST00000506388 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
RCN1-202ENST00000506388 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
RCN1-202ENST00000506388 LPIN2Q92539 896 aa16.43■□□□□ 0.22
RCN1-202ENST00000506388 EAF2Q96CJ1 260 aaPredicted RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.43■□□□□ 0.22
RCN1-202ENST00000506388 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
RCN1-202ENST00000506388 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
RCN1-202ENST00000506388 FER1L6Q2WGJ9 1857 aa16.42■□□□□ 0.22
RCN1-202ENST00000506388 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
RCN1-202ENST00000506388 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
RCN1-202ENST00000506388 DUOX1Q9NRD9 1551 aa16.41■□□□□ 0.22
RCN1-202ENST00000506388 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 ATP2B4P23634 1241 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
RCN1-202ENST00000506388 STAP2Q9UGK3 403 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 APBB1O00213 710 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
RCN1-202ENST00000506388 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
RCN1-202ENST00000506388 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
RCN1-202ENST00000506388 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 AOX1Q06278 1338 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 TAF5LO75529 589 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
RCN1-202ENST00000506388 GPSM2P81274 684 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 MPNDQ8N594 471 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 PSMD1Q99460 953 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
RCN1-202ENST00000506388 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
RCN1-202ENST00000506388 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
RCN1-202ENST00000506388 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
RCN1-202ENST00000506388 SLC5A1P13866 664 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 AACSQ86V21 672 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 HELBQ8NG08 1087 aaPredicted RBP16.38■□□□□ 0.21
RCN1-202ENST00000506388 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 GGA1Q9UJY5 639 aa16.38■□□□□ 0.21
RCN1-202ENST00000506388 PDE4AP27815 886 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 TIMM10P62072 90 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 PLEKHM2Q8IWE5 1019 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 SUPT20HQ8NEM7 779 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms