RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 EXOC6BQ9Y2D4 811 aa8.92□□□□□ -0.98
NUP54-204ENST00000506098 RIPOR2Q9Y4F9 1068 aa8.92□□□□□ -0.98
NUP54-204ENST00000506098 NPR1P16066 1061 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 IL15P40933 162 aaPredicted RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 TGFB2P61812 414 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 RPS8P62241 208 aaKnown RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 GRAPQ13588 217 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 STYK1Q6J9G0 422 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 LDHAL6AQ6ZMR3 332 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 GRAPLQ8TC17 118 aaPredicted RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 KIF1BPQ96EK5 621 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 MASTLQ96GX5 879 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 RBM17Q96I25 401 aaKnown RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 CCDC85AQ96PX6 553 aaPredicted RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 PUS3Q9BZE2 481 aaKnown RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 LRRCC1Q9C099 1032 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 SPON1Q9HCB6 807 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
NUP54-204ENST00000506098 BSDC1Q9NW68 430 aaPredicted RBP8.91□□□□□ -0.98
NUP54-204ENST00000506098 H0YIN7 160 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 BBOX1O75936 387 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 IGHMBP2P38935 993 aaKnown RBP8.9□□□□□ -0.98
NUP54-204ENST00000506098 LRRC24Q50LG9 513 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 TAF7LQ5H9L4 462 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 ANKRD45Q5TZF3 282 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 TMC4Q7Z404 712 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 VGLL2Q8N8G2 317 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 CELF1Q92879 486 aaKnown RBP8.9□□□□□ -0.98
NUP54-204ENST00000506098 SIL1Q9H173 461 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
NUP54-204ENST00000506098 MROH5Q6ZUA9 1318 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 KCNA3P22001 575 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 CHD1LQ86WJ1 897 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 C2CD5Q86YS7 1000 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 MPHOSPH8Q99549 860 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 MINPP1Q9UNW1 487 aa8.89□□□□□ -0.99
NUP54-204ENST00000506098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.89□□□□□ -0.99
NUP54-204ENST00000506098 ZNF609O15014 1411 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 SCN9AQ15858 1988 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 MYH2Q9UKX2 1941 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 SALL3Q9BXA9 1300 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 DUOX1Q9NRD9 1551 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 SMARCA5O60264 1052 aaPredicted RBP8.88□□□□□ -0.99
NUP54-204ENST00000506098 PDE8BO95263 885 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 TFCP2Q12800 502 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
NUP54-204ENST00000506098 CNKSR1Q969H4 720 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 CNNM1Q9NRU3 951 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 CEP126Q9P2H0 1117 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 SNED1Q8TER0 1413 aa8.88□□□□□ -0.99
NUP54-204ENST00000506098 CDK5RAP2Q96SN8 1893 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 FGFR2P21802 821 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 PDE4AP27815 886 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 CHRNA5P30532 468 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 CHRNDQ07001 517 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 SP8Q8IXZ3 490 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 CLASRPQ8N2M8 674 aaKnown RBP8.87□□□□□ -0.99
NUP54-204ENST00000506098 LNPKQ9C0E8 428 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 ANKRD2Q9GZV1 360 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 OSBPL3Q9H4L5 887 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 PODXL2Q9NZ53 605 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 ZBTB47Q9UFB7 747 aaPredicted RBP8.87□□□□□ -0.99
NUP54-204ENST00000506098 AKAP2Q9Y2D5 859 aa8.87□□□□□ -0.99
NUP54-204ENST00000506098 APBB1O00213 710 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 DPEP1P16444 411 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 UBE4AQ14139 1066 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 TNNI3KQ59H18 835 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 METTL24Q5JXM2 366 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 C16orf71Q8IYS4 520 aaPredicted RBP8.86□□□□□ -0.99
NUP54-204ENST00000506098 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 ZNF622Q969S3 477 aaKnown RBP eCLIP8.86□□□□□ -0.99
NUP54-204ENST00000506098 EAF2Q96CJ1 260 aaPredicted RBP8.86□□□□□ -0.99
NUP54-204ENST00000506098 IL1RAPL2Q9NP60 686 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 ATP6V0A2Q9Y487 856 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 FPGT-TNNI3KV9GXZ4 949 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 ECM29Q5VYK3 1845 aa8.86□□□□□ -0.99
NUP54-204ENST00000506098 XDHP47989 1333 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 A0A0G2JLW4 131 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 A0A1B0GUL7 405 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 PPEF1O14829 653 aaPredicted RBP8.85□□□□□ -0.99
NUP54-204ENST00000506098 ZBTB22O15209 634 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 PUM3Q15397 648 aaKnown RBP8.85□□□□□ -0.99
NUP54-204ENST00000506098 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 CC2D2BQ6DHV5 1058 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
NUP54-204ENST00000506098 C15orf52Q6ZUT6 534 aaKnown RBP8.85□□□□□ -0.99
NUP54-204ENST00000506098 TTLL6Q8N841 843 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 PIM2Q9P1W9 311 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 LEMD3Q9Y2U8 911 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 MAST2Q6P0Q8 1798 aa8.85□□□□□ -0.99
NUP54-204ENST00000506098 FOCADQ5VW36 1801 aa8.84□□□□□ -0.99
NUP54-204ENST00000506098 AOX1Q06278 1338 aa8.84□□□□□ -0.99
NUP54-204ENST00000506098 TTC41PQ6P2S7 1318 aa8.84□□□□□ -0.99
NUP54-204ENST00000506098 IRS2Q9Y4H2 1338 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms