RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 C8orf34Q49A92 452 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ALYREFQ86V81 257 aaKnown RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ABI2Q9NYB9 513 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FRRS1LQ9P0K9 344 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 H3BRB1 525 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MSTNO14793 375 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 ARID4AP29374 1257 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 AAMPQ13685 434 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TUT1Q9H6E5 874 aaKnown RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRIM33Q9UPN9 1127 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MTMR7Q9Y216 660 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 SPDYE3A6NKU9 549 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ICMTO60725 284 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 FAM13AO94988 1023 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 GHRHP01286 108 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ACPPP15309 386 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 SF3B2Q13435 895 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ECM1Q16610 540 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 PDE12Q6L8Q7 609 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 C1orf127Q8N9H9 656 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 IGHA1P01876 353 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 BAG6P46379 1132 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 HYAL2Q12891 473 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 SHISA2Q6UWI4 295 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 TXNDC2Q86VQ3 553 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 CHRDQ9H2X0 955 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 WFDC8Q8IUA0 241 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 FMR1NBQ8N0W7 255 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC9Q92623 222 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 FOXD3Q9UJU5 478 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 DEAF1O75398 565 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRPA1O75762 1119 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 KIF4AO95239 1232 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 SELPP16109 830 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 PCSK2P16519 638 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 RAC1P63000 192 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 XKR5Q6UX68 686 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 LACRTQ9GZZ8 138 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 APBA3O96018 575 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 ELNP15502 786 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CES1P23141 567 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CEP135Q66GS9 1140 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 NCAPG2Q86XI2 1143 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 GJD3Q8N144 294 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 IL22RA1Q8N6P7 574 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CEP120Q8N960 986 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 EREGO14944 169 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC16Q8NEE8 873 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 SALL4Q9UJQ4 1053 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 CDC25BP30305 580 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 DOC2BQ14184 412 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 PBX4Q9BYU1 374 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 PHACTR2O75167 634 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 POLR3DP05423 398 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 FURINP09958 794 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 GATA4P43694 442 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 MBTPS1Q14703 1052 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 FBXO11Q86XK2 927 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 SNX29Q8TEQ0 813 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 LATS2Q9NRM7 1088 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 NFKBIEO00221 500 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 EPHA1P21709 976 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 USP5P45974 858 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 DTWD1Q8N5C7 304 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 DZANK1Q9NVP4 752 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 BRPF3Q9ULD4 1205 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SOWAHDA6NJG2 315 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 DLL1O00548 723 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 PDE4CQ08493 712 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms