RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 C8orf34Q49A92 452 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ALYREFQ86V81 257 aaKnown RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ABI2Q9NYB9 513 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FRRS1LQ9P0K9 344 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 H3BRB1 525 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MSTNO14793 375 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 ARID4AP29374 1257 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 AAMPQ13685 434 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TUT1Q9H6E5 874 aaKnown RBP6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRIM33Q9UPN9 1127 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 MTMR7Q9Y216 660 aa6.71□□□□□ -1.34
HMGB1P29-201ENST00000505659 SPDYE3A6NKU9 549 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ICMTO60725 284 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 FAM13AO94988 1023 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 GHRHP01286 108 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ACPPP15309 386 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 SF3B2Q13435 895 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ECM1Q16610 540 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 PDE12Q6L8Q7 609 aaKnown RBP6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 C1orf127Q8N9H9 656 aa6.7□□□□□ -1.34
HMGB1P29-201ENST00000505659 IGHA1P01876 353 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 BAG6P46379 1132 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 HYAL2Q12891 473 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 SHISA2Q6UWI4 295 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 TXNDC2Q86VQ3 553 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 CHRDQ9H2X0 955 aa6.69□□□□□ -1.34
HMGB1P29-201ENST00000505659 WFDC8Q8IUA0 241 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 FMR1NBQ8N0W7 255 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC9Q92623 222 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 FOXD3Q9UJU5 478 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P29-201ENST00000505659 DEAF1O75398 565 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 TRPA1O75762 1119 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 KIF4AO95239 1232 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 SELPP16109 830 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 PCSK2P16519 638 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 RAC1P63000 192 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 XKR5Q6UX68 686 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 LACRTQ9GZZ8 138 aa6.67□□□□□ -1.34
HMGB1P29-201ENST00000505659 APBA3O96018 575 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 ELNP15502 786 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CES1P23141 567 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CEP135Q66GS9 1140 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 NCAPG2Q86XI2 1143 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 GJD3Q8N144 294 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 IL22RA1Q8N6P7 574 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 CEP120Q8N960 986 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
HMGB1P29-201ENST00000505659 EREGO14944 169 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 TTC16Q8NEE8 873 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 SALL4Q9UJQ4 1053 aa6.65□□□□□ -1.34
HMGB1P29-201ENST00000505659 CDC25BP30305 580 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 DOC2BQ14184 412 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 PBX4Q9BYU1 374 aa6.64□□□□□ -1.35
HMGB1P29-201ENST00000505659 PHACTR2O75167 634 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 POLR3DP05423 398 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 FURINP09958 794 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 GATA4P43694 442 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 MBTPS1Q14703 1052 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 FBXO11Q86XK2 927 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 SNX29Q8TEQ0 813 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 LATS2Q9NRM7 1088 aa6.63□□□□□ -1.35
HMGB1P29-201ENST00000505659 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 NFKBIEO00221 500 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 EPHA1P21709 976 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 USP5P45974 858 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 DTWD1Q8N5C7 304 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 DZANK1Q9NVP4 752 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 BRPF3Q9ULD4 1205 aa6.62□□□□□ -1.35
HMGB1P29-201ENST00000505659 SOWAHDA6NJG2 315 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 DLL1O00548 723 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 PDE4CQ08493 712 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms