RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 EPS15P42566 896 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 ST5P78524 1137 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 SAPCD2Q86UD0 394 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 ZIC5Q96T25 663 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 POLR2AP24928 1970 aaKnown RBP9.62□□□□□ -0.87
VCAN-206ENST00000505615 CEP290O15078 2479 aa9.62□□□□□ -0.87
VCAN-206ENST00000505615 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 TJAP1Q5JTD0 557 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 SULT6B1Q6IMI4 303 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 RTKN2Q8IZC4 609 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 HHIPL1Q96JK4 782 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 FAM198AQ9UFP1 575 aa9.61□□□□□ -0.87
VCAN-206ENST00000505615 KIAA0100Q14667 2235 aaKnown RBP9.6□□□□□ -0.87
VCAN-206ENST00000505615 STARD3NLO95772 234 aa9.6□□□□□ -0.87
VCAN-206ENST00000505615 NPR1P16066 1061 aa9.6□□□□□ -0.87
VCAN-206ENST00000505615 LAPTM4AQ15012 233 aa9.6□□□□□ -0.87
VCAN-206ENST00000505615 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
VCAN-206ENST00000505615 TRIOBPQ9H2D6 2365 aa9.59□□□□□ -0.87
VCAN-206ENST00000505615 CELF2O95319 508 aaKnown RBP9.59□□□□□ -0.87
VCAN-206ENST00000505615 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
VCAN-206ENST00000505615 IL6STP40189 918 aaPredicted RBP9.59□□□□□ -0.87
VCAN-206ENST00000505615 USP50Q70EL3 339 aaPredicted RBP9.59□□□□□ -0.87
VCAN-206ENST00000505615 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
VCAN-206ENST00000505615 PSMD1Q99460 953 aa9.59□□□□□ -0.87
VCAN-206ENST00000505615 GJA3Q9Y6H8 435 aa9.59□□□□□ -0.87
VCAN-206ENST00000505615 HEG1Q9ULI3 1381 aa9.59□□□□□ -0.87
VCAN-206ENST00000505615 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
VCAN-206ENST00000505615 NPHP1O15259 732 aa9.58□□□□□ -0.88
VCAN-206ENST00000505615 A1BGP04217 495 aa9.58□□□□□ -0.88
VCAN-206ENST00000505615 IL13P35225 146 aa9.58□□□□□ -0.88
VCAN-206ENST00000505615 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
VCAN-206ENST00000505615 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
VCAN-206ENST00000505615 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
VCAN-206ENST00000505615 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 PRSS12P56730 875 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 PPP4CP60510 307 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 SLC51AQ86UW1 340 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 NBPF5PQ86XG9 351 aaPredicted RBP9.57□□□□□ -0.88
VCAN-206ENST00000505615 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
VCAN-206ENST00000505615 GLIS2Q9BZE0 524 aaPredicted RBP9.57□□□□□ -0.88
VCAN-206ENST00000505615 HTTP42858 3142 aa9.56□□□□□ -0.88
VCAN-206ENST00000505615 SMAPO00193 183 aa9.56□□□□□ -0.88
VCAN-206ENST00000505615 NOGQ13253 232 aa9.56□□□□□ -0.88
VCAN-206ENST00000505615 DZIP3Q86Y13 1208 aaKnown RBP9.56□□□□□ -0.88
VCAN-206ENST00000505615 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
VCAN-206ENST00000505615 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 NUP98P52948 1817 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 FAM155AB1AL88 458 aaPredicted RBP9.55□□□□□ -0.88
VCAN-206ENST00000505615 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
VCAN-206ENST00000505615 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 ADARB2Q9NS39 739 aaKnown RBP9.55□□□□□ -0.88
VCAN-206ENST00000505615 SAGE1Q9NXZ1 904 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 PGAP2Q9UHJ9 254 aa9.55□□□□□ -0.88
VCAN-206ENST00000505615 SZT2Q5T011 3432 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 CRY2Q49AN0 593 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
VCAN-206ENST00000505615 ZNF790Q6PG37 636 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 CLEC4GQ6UXB4 293 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 MTRQ99707 1265 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 TEX13AQ9BXU3 409 aaPredicted RBP9.54□□□□□ -0.88
VCAN-206ENST00000505615 RIC1Q4ADV7 1423 aa9.54□□□□□ -0.88
VCAN-206ENST00000505615 NPC1L1Q9UHC9 1359 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 PIP4K2AP48426 406 aaPredicted RBP9.53□□□□□ -0.88
VCAN-206ENST00000505615 HIRAP54198 1017 aaPredicted RBP9.53□□□□□ -0.88
VCAN-206ENST00000505615 CTU1Q7Z7A3 348 aaKnown RBP9.53□□□□□ -0.88
VCAN-206ENST00000505615 LARGE2Q8N3Y3 721 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 TATDN2Q93075 761 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 ZNF408Q9H9D4 720 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
VCAN-206ENST00000505615 GFRA3O60609 400 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 CENPFP49454 3210 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 HUNKP57058 714 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 TRPM4Q8TD43 1214 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
VCAN-206ENST00000505615 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 RNF186Q9NXI6 227 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
VCAN-206ENST00000505615 BRCA2P51587 3418 aa9.52□□□□□ -0.89
VCAN-206ENST00000505615 KCNQ3O43525 872 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 TRPA1O75762 1119 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 HMOX1P09601 288 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 GMPSP49915 693 aaPredicted RBP9.51□□□□□ -0.89
VCAN-206ENST00000505615 KIF23Q02241 960 aaPredicted RBP9.51□□□□□ -0.89
VCAN-206ENST00000505615 DLK2Q6UY11 383 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 NIM1KQ8IY84 436 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 NBPF15Q8N660 670 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 IL17REQ8NFR9 667 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms