RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 RTFDC1Q9BY42 306 aaPredicted RBP16.61■□□□□ 0.25
ITGA3-206ENST00000505612 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
ITGA3-206ENST00000505612 CHD4Q14839 1912 aa16.6■□□□□ 0.25
ITGA3-206ENST00000505612 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
ITGA3-206ENST00000505612 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
ITGA3-206ENST00000505612 CASP7P55210 303 aa16.6■□□□□ 0.25
ITGA3-206ENST00000505612 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
ITGA3-206ENST00000505612 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
ITGA3-206ENST00000505612 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
ITGA3-206ENST00000505612 IGHMBP2P38935 993 aaKnown RBP16.59■□□□□ 0.25
ITGA3-206ENST00000505612 POLA2Q14181 598 aa16.59■□□□□ 0.25
ITGA3-206ENST00000505612 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
ITGA3-206ENST00000505612 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
ITGA3-206ENST00000505612 NSFL1CQ9UNZ2 370 aaKnown RBP16.59■□□□□ 0.25
ITGA3-206ENST00000505612 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
ITGA3-206ENST00000505612 ANKRD18BA2A2Z9 1011 aa16.58■□□□□ 0.24
ITGA3-206ENST00000505612 IFIT5Q13325 482 aaKnown RBP16.58■□□□□ 0.24
ITGA3-206ENST00000505612 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
ITGA3-206ENST00000505612 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
ITGA3-206ENST00000505612 EYA3Q99504 573 aa16.58■□□□□ 0.24
ITGA3-206ENST00000505612 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
ITGA3-206ENST00000505612 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
ITGA3-206ENST00000505612 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
ITGA3-206ENST00000505612 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 LNPKQ9C0E8 428 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 GREM2Q9H772 168 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 SEC31BQ9NQW1 1179 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 ANKIB1Q9P2G1 1089 aa16.57■□□□□ 0.24
ITGA3-206ENST00000505612 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
ITGA3-206ENST00000505612 ITGA6P23229 1130 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 PRELPP51888 382 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
ITGA3-206ENST00000505612 FOXO4P98177 505 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 NIM1KQ8IY84 436 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
ITGA3-206ENST00000505612 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
ITGA3-206ENST00000505612 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
ITGA3-206ENST00000505612 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
ITGA3-206ENST00000505612 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
ITGA3-206ENST00000505612 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-206ENST00000505612 WASHC4Q2M389 1173 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 LMBR1LQ6UX01 489 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
ITGA3-206ENST00000505612 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
ITGA3-206ENST00000505612 XDHP47989 1333 aa16.54■□□□□ 0.24
ITGA3-206ENST00000505612 FZD9O00144 591 aa16.54■□□□□ 0.24
ITGA3-206ENST00000505612 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
ITGA3-206ENST00000505612 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
ITGA3-206ENST00000505612 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
ITGA3-206ENST00000505612 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
ITGA3-206ENST00000505612 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
ITGA3-206ENST00000505612 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
ITGA3-206ENST00000505612 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
ITGA3-206ENST00000505612 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
ITGA3-206ENST00000505612 ZNRF3Q9ULT6 936 aa16.53■□□□□ 0.24
ITGA3-206ENST00000505612 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
ITGA3-206ENST00000505612 G3V3G9 751 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.24
ITGA3-206ENST00000505612 GPSM2P81274 684 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 DCAF8Q5TAQ9 597 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 GPC2Q8N158 579 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
ITGA3-206ENST00000505612 TNIP1Q15025 636 aa16.51■□□□□ 0.23
ITGA3-206ENST00000505612 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
ITGA3-206ENST00000505612 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
ITGA3-206ENST00000505612 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 TOMM70O94826 608 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 UFL1O94874 794 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 AOC3Q16853 763 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
ITGA3-206ENST00000505612 AOX1Q06278 1338 aa16.49■□□□□ 0.23
ITGA3-206ENST00000505612 FER1L6Q2WGJ9 1857 aa16.49■□□□□ 0.23
ITGA3-206ENST00000505612 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
ITGA3-206ENST00000505612 KIF1BPQ96EK5 621 aa16.49■□□□□ 0.23
ITGA3-206ENST00000505612 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
ITGA3-206ENST00000505612 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
ITGA3-206ENST00000505612 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
ITGA3-206ENST00000505612 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
ITGA3-206ENST00000505612 KIF3CO14782 793 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
ITGA3-206ENST00000505612 KCNJ4P48050 445 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 NMRK2Q9NPI5 230 aa16.48■□□□□ 0.23
ITGA3-206ENST00000505612 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms