RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 LBX1P52954 281 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 GRM1Q13255 1194 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 CCDC152Q4G0S7 254 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 SAMD7Q7Z3H4 446 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 EYA3Q99504 573 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 IGKV5-2P06315 115 aa15.73■□□□□ 0.11
SNHG4-202ENST00000505522 HSPA8P11142 646 aaKnown RBP15.73■□□□□ 0.11
SNHG4-202ENST00000505522 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
SNHG4-202ENST00000505522 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
SNHG4-202ENST00000505522 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
SNHG4-202ENST00000505522 CHMP4AQ9BY43 222 aa15.73■□□□□ 0.11
SNHG4-202ENST00000505522 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 AOC2O75106 756 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 UFL1O94874 794 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 EGFRP00533 1210 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 ECE1P42892 770 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 DLK2Q6UY11 383 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 SAPCD2Q86UD0 394 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 ANKIB1Q9P2G1 1089 aa15.72■□□□□ 0.11
SNHG4-202ENST00000505522 SCN9AQ15858 1988 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 RPS12P25398 132 aaKnown RBP15.71■□□□□ 0.11
SNHG4-202ENST00000505522 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
SNHG4-202ENST00000505522 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 G2E3Q7L622 706 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 USP48Q86UV5 1035 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
SNHG4-202ENST00000505522 ZNF408Q9H9D4 720 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
SNHG4-202ENST00000505522 CTSWP56202 376 aa15.7■□□□□ 0.1
SNHG4-202ENST00000505522 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
SNHG4-202ENST00000505522 TWISTNBQ3B726 338 aaPredicted RBP15.7■□□□□ 0.1
SNHG4-202ENST00000505522 STK31Q9BXU1 1019 aa15.7■□□□□ 0.1
SNHG4-202ENST00000505522 VIL1P09327 827 aaKnown RBP15.69■□□□□ 0.1
SNHG4-202ENST00000505522 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
SNHG4-202ENST00000505522 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
SNHG4-202ENST00000505522 TTLL11Q8NHH1 800 aa15.69■□□□□ 0.1
SNHG4-202ENST00000505522 IL16Q14005 1332 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
SNHG4-202ENST00000505522 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 G3V3G9 751 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 GREM2Q9H772 168 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 XDHP47989 1333 aa15.68■□□□□ 0.1
SNHG4-202ENST00000505522 SPEF2Q9C093 1822 aa15.67■□□□□ 0.1
SNHG4-202ENST00000505522 MAP2K2P36507 400 aa15.67■□□□□ 0.1
SNHG4-202ENST00000505522 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
SNHG4-202ENST00000505522 MYH3P11055 1940 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 ADM5C9JUS6 153 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 ATP2B4P23634 1241 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
SNHG4-202ENST00000505522 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 DCPSQ96C86 337 aaKnown RBP15.66■□□□□ 0.1
SNHG4-202ENST00000505522 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
SNHG4-202ENST00000505522 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 ASTN2O75129 1339 aaPredicted RBP15.66■□□□□ 0.1
SNHG4-202ENST00000505522 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
SNHG4-202ENST00000505522 H7C1W4 665 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 FLIIQ13045 1269 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 RSBN1LQ6PCB5 846 aaPredicted RBP15.65■□□□□ 0.1
SNHG4-202ENST00000505522 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
SNHG4-202ENST00000505522 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 MINPP1Q9UNW1 487 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
SNHG4-202ENST00000505522 PSME4Q14997 1843 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 ZNF609O15014 1411 aa15.65■□□□□ 0.1
SNHG4-202ENST00000505522 POLR2AP24928 1970 aaKnown RBP15.65■□□□□ 0.1
SNHG4-202ENST00000505522 HUNKP57058 714 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 ZNF280AP59817 542 aaPredicted RBP15.64■□□□□ 0.09
SNHG4-202ENST00000505522 GCKRQ14397 625 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 AGBL3Q8NEM8 1001 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 ZIC5Q96T25 663 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 GMLQ99445 158 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 GGA3Q9NZ52 723 aa15.64■□□□□ 0.09
SNHG4-202ENST00000505522 CASP7P55210 303 aa15.63■□□□□ 0.09
SNHG4-202ENST00000505522 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
SNHG4-202ENST00000505522 GBA2Q9HCG7 927 aaPredicted RBP15.63■□□□□ 0.09
SNHG4-202ENST00000505522 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 USP17L3A6NCW0 530 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 USP17L4A6NCW7 530 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 ANP32CO43423 234 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 VAMP4O75379 141 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 CCT4P50991 539 aaKnown RBP15.62■□□□□ 0.09
SNHG4-202ENST00000505522 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
SNHG4-202ENST00000505522 EXOSC9Q06265 439 aaKnown RBP15.62■□□□□ 0.09
SNHG4-202ENST00000505522 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
SNHG4-202ENST00000505522 SCARF1Q14162 830 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 USP17L1Q7RTZ2 530 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 DNAAF4Q8WXU2 420 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 PLA2G12BQ9BX93 195 aa15.62■□□□□ 0.09
SNHG4-202ENST00000505522 FAM155AB1AL88 458 aaPredicted RBP15.61■□□□□ 0.09
SNHG4-202ENST00000505522 USP17L8P0C7I0 530 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms