RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 H0YIN7 160 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 YBX3P16989 372 aaKnown RBP eCLIP10.39□□□□□ -0.759e-7■□□□□ 10.7
CDC42SE2-208ENST00000505065 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 FTSJ3Q8IY81 847 aaKnown RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 ZNF512BQ96KM6 892 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 SLC4A10Q6U841 1118 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 SEC31BQ9NQW1 1179 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 CHRNA5P30532 468 aa10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 C9orf78Q9NZ63 289 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE2-208ENST00000505065 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 ITPRIPQ8IWB1 547 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 PIM2Q9P1W9 311 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 PPEF1O14829 653 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 NFKBIEO00221 500 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 SLC51AQ86UW1 340 aa10.38□□□□□ -0.75
CDC42SE2-208ENST00000505065 SASH1O94885 1247 aa10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 EXOC6Q8TAG9 804 aa10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 EYA2O00167 538 aa10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
CDC42SE2-208ENST00000505065 MYH2Q9UKX2 1941 aa10.36□□□□□ -0.75
CDC42SE2-208ENST00000505065 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
CDC42SE2-208ENST00000505065 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE2-208ENST00000505065 IGSF3O75054 1194 aa10.36□□□□□ -0.75
CDC42SE2-208ENST00000505065 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDC42SE2-208ENST00000505065 MSH5O43196 834 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 FKBP1AP62942 108 aaKnown RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 LEMD3Q9Y2U8 911 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 GPSM2P81274 684 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 XDHP47989 1333 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 IL1R1P14778 569 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 IL15P40933 162 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 DALRD3Q5D0E6 543 aaKnown RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 RTKN2Q8IZC4 609 aa10.35□□□□□ -0.75
CDC42SE2-208ENST00000505065 NAV1Q8NEY1 1877 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 UBE4AQ14139 1066 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 RPGRQ92834 1020 aaKnown RBP10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 ANKRD2Q9GZV1 360 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 POLLQ9UGP5 575 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 PUS3Q9BZE2 481 aaKnown RBP10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 THSD7BQ9C0I4 1608 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 PDE8BO95263 885 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 TBC1D16Q8TBP0 767 aa10.34□□□□□ -0.75
CDC42SE2-208ENST00000505065 IGHDP01880 384 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 CHRNDQ07001 517 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 CCDC93Q567U6 631 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 TRPM7Q96QT4 1865 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 AOX1Q06278 1338 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 FZD9O00144 591 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 KIAA2012Q0VF49 1180 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 GCC1Q96CN9 775 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 FAM205AQ6ZU69 1335 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 SRGAP3O43295 1099 aa10.33□□□□□ -0.76
CDC42SE2-208ENST00000505065 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 STAP2Q9UGK3 403 aa10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 NUCB1Q02818 461 aa10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 OTOFQ9HC10 1997 aa10.32□□□□□ -0.76
CDC42SE2-208ENST00000505065 RFX7Q2KHR2 1363 aa10.31□□□□□ -0.76
CDC42SE2-208ENST00000505065 PHIPQ8WWQ0 1821 aa10.31□□□□□ -0.76
CDC42SE2-208ENST00000505065 ERC1Q8IUD2 1116 aa10.31□□□□□ -0.76
CDC42SE2-208ENST00000505065 MMP14P50281 582 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 PA2G4Q9UQ80 394 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 IGHMBP2P38935 993 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 HSP90AB4PQ58FF6 505 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 SUPT20HQ8NEM7 779 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 TDRD7Q8NHU6 1098 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 GOLGB1Q14789 3259 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 GMLQ99445 158 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 LPIN2Q92539 896 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
CDC42SE2-208ENST00000505065 WTIPA6NIX2 430 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms