RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 ITGB4P16144 1822 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 Q8N3U1 123 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 TSC1Q92574 1164 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 C1QTNF2Q9BXJ5 285 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
CDH9-203ENST00000505045 NCAPD2Q15021 1401 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 FLT4P35916 1363 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 EXOC5O00471 708 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 AMPHP49418 695 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 POLR3GLQ9BT43 218 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 INSRP06213 1382 aa6.74□□□□□ -1.33
CDH9-203ENST00000505045 PLSCR1O15162 318 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 FOXK2Q01167 660 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 ARMC2Q8NEN0 867 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 QSER1Q2KHR3 1735 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 TXNRD1Q16881 649 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 FAM174AQ8TBP5 190 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
CDH9-203ENST00000505045 GOPCQ9HD26 462 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 WASF2Q9Y6W5 498 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 SMG6Q86US8 1419 aaKnown RBP6.73□□□□□ -1.33
CDH9-203ENST00000505045 TAF1LQ8IZX4 1826 aa6.73□□□□□ -1.33
CDH9-203ENST00000505045 C5P01031 1676 aa6.72□□□□□ -1.33
CDH9-203ENST00000505045 EIF4G2P78344 907 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDH9-203ENST00000505045 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
CDH9-203ENST00000505045 LRRN4Q8WUT4 740 aa6.72□□□□□ -1.33
CDH9-203ENST00000505045 TNNT2P45379 298 aaPredicted RBP6.71□□□□□ -1.33
CDH9-203ENST00000505045 KCNQ4P56696 695 aa6.71□□□□□ -1.33
CDH9-203ENST00000505045 ZNF827Q17R98 1081 aa6.71□□□□□ -1.33
CDH9-203ENST00000505045 TRIM46Q7Z4K8 759 aa6.71□□□□□ -1.33
CDH9-203ENST00000505045 BPHLQ86WA6 291 aaPredicted RBP6.71□□□□□ -1.33
CDH9-203ENST00000505045 GPKOWQ92917 476 aaPredicted RBP eCLIP6.71□□□□□ -1.33
CDH9-203ENST00000505045 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.33
CDH9-203ENST00000505045 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.34
CDH9-203ENST00000505045 CGNL1Q0VF96 1302 aa6.71□□□□□ -1.34
CDH9-203ENST00000505045 COL24A1Q17RW2 1714 aa6.71□□□□□ -1.34
CDH9-203ENST00000505045 ADH1CP00326 375 aa6.71□□□□□ -1.34
CDH9-203ENST00000505045 NNTQ13423 1086 aa6.71□□□□□ -1.34
CDH9-203ENST00000505045 TRMT44Q8IYL2 757 aaKnown RBP6.71□□□□□ -1.34
CDH9-203ENST00000505045 KIF7Q2M1P5 1343 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 VIRMAQ69YN4 1812 aaKnown RBP6.7□□□□□ -1.34
CDH9-203ENST00000505045 PPM1GO15355 546 aaPredicted RBP6.7□□□□□ -1.34
CDH9-203ENST00000505045 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
CDH9-203ENST00000505045 TIMP2P16035 220 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 GRM5P41594 1212 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 BRPF1P55201 1214 aaPredicted RBP6.7□□□□□ -1.34
CDH9-203ENST00000505045 NBPF14Q5TI25 921 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 PANK3Q9H999 370 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 POLKQ9UBT6 870 aa6.7□□□□□ -1.34
CDH9-203ENST00000505045 CYP27B1O15528 508 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 ZBTB7AO95365 584 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 ZCRB1Q8TBF4 217 aaKnown RBP6.69□□□□□ -1.34
CDH9-203ENST00000505045 SYTL4Q96C24 671 aaPredicted RBP6.69□□□□□ -1.34
CDH9-203ENST00000505045 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 SLC15A2Q16348 729 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 PDXDC2PQ6P474 469 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 MAP4K5Q9Y4K4 846 aa6.69□□□□□ -1.34
CDH9-203ENST00000505045 UBR3Q6ZT12 1888 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 NR3C2P08235 984 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 RFC5P40937 340 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 EIF4A2Q14240 407 aaKnown RBP6.68□□□□□ -1.34
CDH9-203ENST00000505045 NR6A1Q15406 480 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 RAPGEF4Q8WZA2 1011 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 ADAMTS8Q9UP79 889 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 PCDH11XQ9BZA7 1347 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 PCDH11YQ9BZA8 1340 aa6.68□□□□□ -1.34
CDH9-203ENST00000505045 ZC3H4Q9UPT8 1303 aaKnown RBP6.68□□□□□ -1.34
CDH9-203ENST00000505045 NR5A1Q13285 461 aa6.67□□□□□ -1.34
CDH9-203ENST00000505045 OCSTAMPQ9BR26 566 aa6.67□□□□□ -1.34
CDH9-203ENST00000505045 FKBPLQ9UIM3 349 aa6.67□□□□□ -1.34
CDH9-203ENST00000505045 AP1G2O75843 785 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 BMP1P13497 986 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 TATP17735 454 aaPredicted RBP6.66□□□□□ -1.34
CDH9-203ENST00000505045 ERFEQ4G0M1 354 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 AMIGO3Q86WK7 504 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 AEBP1Q8IUX7 1158 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 HMX1Q9NP08 348 aaPredicted RBP6.66□□□□□ -1.34
CDH9-203ENST00000505045 STK32BQ9NY57 414 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 KDM6AO15550 1401 aaPredicted RBP6.66□□□□□ -1.34
CDH9-203ENST00000505045 PNPLA7Q6ZV29 1317 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 IGSF1Q8N6C5 1336 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 COL5A3P25940 1745 aaPredicted RBP6.66□□□□□ -1.34
CDH9-203ENST00000505045 PALLDQ8WX93 1383 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 SCN11AQ9UI33 1791 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 USP17L8P0C7I0 530 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 WDR4P57081 412 aaKnown RBP6.66□□□□□ -1.34
CDH9-203ENST00000505045 AGERQ15109 404 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 EPS8L1Q8TE68 723 aa6.66□□□□□ -1.34
CDH9-203ENST00000505045 COL3A1P02461 1466 aaPredicted RBP6.65□□□□□ -1.34
CDH9-203ENST00000505045 IL27Q8NEV9 243 aa6.65□□□□□ -1.34
CDH9-203ENST00000505045 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
CDH9-203ENST00000505045 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms