RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 CLUAP1Q96AJ1 413 aa25.4■■□□□ 1.66
HERC6-205ENST00000504905 TNNQ9UQP3 1299 aa25.4■■□□□ 1.66
HERC6-205ENST00000504905 ANKRD18BA2A2Z9 1011 aa25.39■■□□□ 1.66
HERC6-205ENST00000504905 IARSP41252 1262 aaKnown RBP25.39■■□□□ 1.66
HERC6-205ENST00000504905 SUPT20HQ8NEM7 779 aa25.39■■□□□ 1.66
HERC6-205ENST00000504905 RCAN3Q9UKA8 241 aa25.39■■□□□ 1.66
HERC6-205ENST00000504905 POTEIP0CG38 1075 aa25.38■■□□□ 1.65
HERC6-205ENST00000504905 POTEJP0CG39 1038 aa25.38■■□□□ 1.65
HERC6-205ENST00000504905 IGHMBP2P38935 993 aaKnown RBP25.38■■□□□ 1.65
HERC6-205ENST00000504905 IFIT5Q13325 482 aaKnown RBP25.38■■□□□ 1.65
HERC6-205ENST00000504905 KAZALD1Q96I82 304 aa25.38■■□□□ 1.65
HERC6-205ENST00000504905 IQCA1LA6NCM1 817 aa25.37■■□□□ 1.65
HERC6-205ENST00000504905 FTSJ3Q8IY81 847 aaKnown RBP25.37■■□□□ 1.65
HERC6-205ENST00000504905 L3MBTL3Q96JM7 780 aaPredicted RBP25.37■■□□□ 1.65
HERC6-205ENST00000504905 RTFDC1Q9BY42 306 aaPredicted RBP25.37■■□□□ 1.65
HERC6-205ENST00000504905 BICC1Q9H694 974 aaKnown RBP25.37■■□□□ 1.65
HERC6-205ENST00000504905 NSFL1CQ9UNZ2 370 aaKnown RBP25.37■■□□□ 1.65
HERC6-205ENST00000504905 UBTFL1P0CB47 393 aaPredicted RBP25.36■■□□□ 1.65
HERC6-205ENST00000504905 GPSM2P81274 684 aa25.36■■□□□ 1.65
HERC6-205ENST00000504905 CCDC57Q2TAC2 916 aa25.36■■□□□ 1.65
HERC6-205ENST00000504905 MPHOSPH8Q99549 860 aa25.36■■□□□ 1.65
HERC6-205ENST00000504905 BSDC1Q9NW68 430 aaPredicted RBP25.36■■□□□ 1.65
HERC6-205ENST00000504905 MKRN1Q9UHC7 482 aaKnown RBP25.36■■□□□ 1.65
HERC6-205ENST00000504905 ANKIB1Q9P2G1 1089 aa25.35■■□□□ 1.65
HERC6-205ENST00000504905 DUOX1Q9NRD9 1551 aa25.35■■□□□ 1.65
HERC6-205ENST00000504905 LTBP1Q14766 1721 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 TAF7LQ5H9L4 462 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 LDHDQ86WU2 507 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 DZIP1LQ8IYY4 767 aaKnown RBP25.34■■□□□ 1.65
HERC6-205ENST00000504905 LARGE2Q8N3Y3 721 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 HDAC5Q9UQL6 1122 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 SCN4AP35499 1836 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 PASKQ96RG2 1323 aa25.34■■□□□ 1.65
HERC6-205ENST00000504905 PPIP5K2O43314 1243 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 RABL6Q3YEC7 729 aaPredicted RBP25.33■■□□□ 1.65
HERC6-205ENST00000504905 TMEM57Q8N5G2 664 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 JDP2Q8WYK2 163 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 MEIS3Q99687 375 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 VPS33BQ9H267 617 aa25.33■■□□□ 1.65
HERC6-205ENST00000504905 TAF1DQ9H5J8 278 aaPredicted RBP25.33■■□□□ 1.65
HERC6-205ENST00000504905 CNTNAP1P78357 1384 aa25.32■■□□□ 1.64
HERC6-205ENST00000504905 C6orf229H3BNL8 230 aa25.32■■□□□ 1.64
HERC6-205ENST00000504905 GNAI3P08754 354 aa25.32■■□□□ 1.64
HERC6-205ENST00000504905 AOC3Q16853 763 aa25.32■■□□□ 1.64
HERC6-205ENST00000504905 PODXL2Q9NZ53 605 aa25.32■■□□□ 1.64
HERC6-205ENST00000504905 GGA1Q9UJY5 639 aa25.31■■□□□ 1.64
HERC6-205ENST00000504905 MINPP1Q9UNW1 487 aa25.31■■□□□ 1.64
HERC6-205ENST00000504905 XDHP47989 1333 aa25.31■■□□□ 1.64
HERC6-205ENST00000504905 UFL1O94874 794 aa25.3■■□□□ 1.64
HERC6-205ENST00000504905 TBC1D16Q8TBP0 767 aa25.3■■□□□ 1.64
HERC6-205ENST00000504905 EYA3Q99504 573 aa25.3■■□□□ 1.64
HERC6-205ENST00000504905 POLLQ9UGP5 575 aa25.3■■□□□ 1.64
HERC6-205ENST00000504905 COL4A5P29400 1685 aa25.29■■□□□ 1.64
HERC6-205ENST00000504905 MS4A1P11836 297 aa25.29■■□□□ 1.64
HERC6-205ENST00000504905 KIAA2012Q0VF49 1180 aa25.29■■□□□ 1.64
HERC6-205ENST00000504905 WASHC4Q2M389 1173 aa25.29■■□□□ 1.64
HERC6-205ENST00000504905 NIM1KQ8IY84 436 aa25.29■■□□□ 1.64
HERC6-205ENST00000504905 ZNF594Q96JF6 807 aaPredicted RBP25.29■■□□□ 1.64
HERC6-205ENST00000504905 LRRFIP2Q9Y608 721 aaKnown RBP25.29■■□□□ 1.64
HERC6-205ENST00000504905 ITGBL1O95965 494 aaPredicted RBP25.28■■□□□ 1.64
HERC6-205ENST00000504905 RLBP1P12271 317 aa25.28■■□□□ 1.64
HERC6-205ENST00000504905 ITPRIPQ8IWB1 547 aa25.28■■□□□ 1.64
HERC6-205ENST00000504905 FOXN1O15353 648 aa25.27■■□□□ 1.64
HERC6-205ENST00000504905 ATP2B4P23634 1241 aa25.27■■□□□ 1.64
HERC6-205ENST00000504905 LDHAL6AQ6ZMR3 332 aa25.27■■□□□ 1.64
HERC6-205ENST00000504905 ANKRD2Q9GZV1 360 aa25.27■■□□□ 1.64
HERC6-205ENST00000504905 CNNM1Q9NRU3 951 aa25.27■■□□□ 1.64
HERC6-205ENST00000504905 A0A1B0GUL6 1792 aa25.26■■□□□ 1.63
HERC6-205ENST00000504905 TMEM88BA6NKF7 163 aa25.26■■□□□ 1.63
HERC6-205ENST00000504905 FZD9O00144 591 aa25.26■■□□□ 1.63
HERC6-205ENST00000504905 PANK1Q8TE04 598 aa25.26■■□□□ 1.63
HERC6-205ENST00000504905 PRDM10Q9NQV6 1147 aa25.26■■□□□ 1.63
HERC6-205ENST00000504905 RIMBP2O15034 1052 aa25.25■■□□□ 1.63
HERC6-205ENST00000504905 PLIN1O60240 522 aa25.25■■□□□ 1.63
HERC6-205ENST00000504905 EIF6P56537 245 aaKnown RBP25.25■■□□□ 1.63
HERC6-205ENST00000504905 CHRNDQ07001 517 aa25.25■■□□□ 1.63
HERC6-205ENST00000504905 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.25■■□□□ 1.63
HERC6-205ENST00000504905 GPR101Q96P66 508 aaPredicted RBP25.25■■□□□ 1.63
HERC6-205ENST00000504905 HACL1Q9UJ83 578 aa25.25■■□□□ 1.63
HERC6-205ENST00000504905 ZNF541Q9H0D2 1346 aa25.25■■□□□ 1.63
HERC6-205ENST00000504905 ADAMTSL1Q8N6G6 1762 aa25.24■■□□□ 1.63
HERC6-205ENST00000504905 ZC3H12CQ9C0D7 883 aaKnown RBP25.24■■□□□ 1.63
HERC6-205ENST00000504905 GNAI2P04899 355 aa25.23■■□□□ 1.63
HERC6-205ENST00000504905 VEGFBP49765 207 aa25.23■■□□□ 1.63
HERC6-205ENST00000504905 EAPPQ56P03 285 aaPredicted RBP25.23■■□□□ 1.63
HERC6-205ENST00000504905 ZNRF3Q9ULT6 936 aa25.23■■□□□ 1.63
HERC6-205ENST00000504905 LEMD3Q9Y2U8 911 aa25.23■■□□□ 1.63
HERC6-205ENST00000504905 EPHX2P34913 555 aa25.22■■□□□ 1.63
HERC6-205ENST00000504905 PNMA8AQ86V59 439 aaPredicted RBP25.22■■□□□ 1.63
HERC6-205ENST00000504905 G3V3G9 751 aa25.21■■□□□ 1.63
HERC6-205ENST00000504905 KCNJ4P48050 445 aa25.21■■□□□ 1.63
HERC6-205ENST00000504905 CTCFP49711 727 aaPredicted RBP25.21■■□□□ 1.63
HERC6-205ENST00000504905 DCAF8Q5TAQ9 597 aa25.21■■□□□ 1.63
HERC6-205ENST00000504905 HELBQ8NG08 1087 aaPredicted RBP25.21■■□□□ 1.63
HERC6-205ENST00000504905 KLHDC4Q8TBB5 520 aa25.21■■□□□ 1.63
HERC6-205ENST00000504905 PUS3Q9BZE2 481 aaKnown RBP25.21■■□□□ 1.63
HERC6-205ENST00000504905 ZNF804BA4D1E1 1349 aa25.2■■□□□ 1.62
HERC6-205ENST00000504905 AIDAQ96BJ3 306 aa25.2■■□□□ 1.62
HERC6-205ENST00000504905 DBNDD1Q9H9R9 158 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms