RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	SLX4	Q8IY92	1834 aa		13.55	□□□□□ -0.24
APBB3-209	ENST00000504872	SNED1	Q8TER0	1413 aa		13.55	□□□□□ -0.24
APBB3-209	ENST00000504872	C21orf2	O43822	256 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	EPHA10	Q5JZY3	1008 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	ZKSCAN2	Q63HK3	967 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	DPY19L2	Q6NUT2	758 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	RPGR	Q92834	1020 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	RCAN3	Q9UKA8	241 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	PITPNM2	Q9BZ72	1349 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	RTL9	Q8NET4	1388 aa		13.54	□□□□□ -0.24
APBB3-209	ENST00000504872	CTSW	P56202	376 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	RPS8	P62241	208 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	GRAP	Q13588	217 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	MAP1S	Q66K74	1059 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	CC2D2B	Q6DHV5	1058 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	DDX46	Q7L014	1031 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	SP8	Q8IXZ3	490 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	SLC17A8	Q8NDX2	589 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	GRAPL	Q8TC17	118 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	CELF1	Q92879	486 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	SEC31B	Q9NQW1	1179 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	ATP6V0A2	Q9Y487	856 aa		13.53	□□□□□ -0.24
APBB3-209	ENST00000504872	RABL6	Q3YEC7	729 aa	Predicted RBP	13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	CCDC152	Q4G0S7	254 aa		13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	OLFM4	Q6UX06	510 aa		13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	FRAT1	Q92837	279 aa	Predicted RBP	13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	SUCLG2	Q96I99	432 aa		13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	YTHDC1	Q96MU7	727 aa	Known RBP	13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	LTBP3	Q9NS15	1303 aa		13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	LAMB2	P55268	1798 aa		13.52	□□□□□ -0.25
APBB3-209	ENST00000504872	RLBP1	P12271	317 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	GRIPAP1	Q4V328	841 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	SOGA3	Q5TF21	947 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	TMC4	Q7Z404	712 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	GREM2	Q9H772	168 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	COL6A3	P12111	3177 aa		13.51	□□□□□ -0.25
APBB3-209	ENST00000504872	ZBTB7B	O15156	539 aa	Predicted RBP	13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	LMBR1L	Q6UX01	489 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	SLC51A	Q86UW1	340 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	DZIP1L	Q8IYY4	767 aa	Known RBP	13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	RTKN2	Q8IZC4	609 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	ANKRD44	Q8N8A2	993 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	CLUAP1	Q96AJ1	413 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	COL4A1	P02462	1669 aa		13.5	□□□□□ -0.25
APBB3-209	ENST00000504872	PPEF1	O14829	653 aa	Predicted RBP	13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	CCDC93	Q567U6	631 aa		13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	EAPP	Q56P03	285 aa	Predicted RBP	13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	CNTROB	Q8N137	903 aa		13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	TMEM57	Q8N5G2	664 aa		13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	PSMD1	Q99460	953 aa		13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	BSDC1	Q9NW68	430 aa	Predicted RBP	13.49	□□□□□ -0.25
APBB3-209	ENST00000504872	ITGA6	P23229	1130 aa		13.48	□□□□□ -0.25
APBB3-209	ENST00000504872	MEIS3	Q99687	375 aa		13.48	□□□□□ -0.25
APBB3-209	ENST00000504872	PODXL2	Q9NZ53	605 aa		13.48	□□□□□ -0.25
APBB3-209	ENST00000504872	DICER1	Q9UPY3	1922 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	TAF1	P21675	1872 aa		13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	FER1L6	Q2WGJ9	1857 aa		13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	ZIC5	Q96T25	663 aa		13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	VPS33B	Q9H267	617 aa		13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	BICC1	Q9H694	974 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-209	ENST00000504872	PLIN1	O60240	522 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	GNAI3	P08754	354 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	MS4A1	P11836	297 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	RFX5	P48382	616 aa	Predicted RBP	13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	MTX1	Q13505	466 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	PDE3A	Q14432	1141 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	CST9	Q5W186	159 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	ANKRD18A	Q8IVF6	992 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	CDC5L	Q99459	802 aa	Known RBP	13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	MINPP1	Q9UNW1	487 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	TRIOBP	Q9H2D6	2365 aa		13.46	□□□□□ -0.25
APBB3-209	ENST00000504872	UBTFL1	P0CB47	393 aa	Predicted RBP	13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	MAP2K2	P36507	400 aa		13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	ECE1	P42892	770 aa		13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	IFIT5	Q13325	482 aa	Known RBP	13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	MPND	Q8N594	471 aa		13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	PANK1	Q8TE04	598 aa		13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	HDAC5	Q9UQL6	1122 aa		13.45	□□□□□ -0.26
APBB3-209	ENST00000504872	ANKRD18B	A2A2Z9	1011 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	CA12	O43570	354 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	GPSM2	P81274	684 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	TAOK3	Q9H2K8	898 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	POLL	Q9UGP5	575 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	CLEC11A	Q9Y240	323 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	RIPOR2	Q9Y4F9	1068 aa		13.44	□□□□□ -0.26
APBB3-209	ENST00000504872	SCN4A	P35499	1836 aa		13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	MYH3	P11055	1940 aa		13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	PTPN12	Q05209	780 aa	Known RBP	13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	CCDC57	Q2TAC2	916 aa		13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	C20orf194	Q5TEA3	1177 aa		13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	CIAPIN1	Q6FI81	312 aa		13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	LRRFIP2	Q9Y608	721 aa	Known RBP	13.43	□□□□□ -0.26
APBB3-209	ENST00000504872	LRRC37A	A6NMS7	1700 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms