RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
PDGFC-204ENST00000504672 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
PDGFC-204ENST00000504672 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
PDGFC-204ENST00000504672 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
PDGFC-204ENST00000504672 RTL5Q5HYW3 569 aaPredicted RBP11.94□□□□□ -0.5
PDGFC-204ENST00000504672 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
PDGFC-204ENST00000504672 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 G3V3G9 751 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
PDGFC-204ENST00000504672 PPP2R1AP30153 589 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 FAM89AQ96GI7 184 aa11.93□□□□□ -0.5
PDGFC-204ENST00000504672 ZC3H12CQ9C0D7 883 aaKnown RBP11.93□□□□□ -0.5
PDGFC-204ENST00000504672 FKTNO75072 461 aa11.92□□□□□ -0.5
PDGFC-204ENST00000504672 TM4SF4P48230 202 aa11.92□□□□□ -0.5
PDGFC-204ENST00000504672 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
PDGFC-204ENST00000504672 PRKG1Q13976 671 aa11.92□□□□□ -0.5
PDGFC-204ENST00000504672 NUP98P52948 1817 aa11.91□□□□□ -0.5
PDGFC-204ENST00000504672 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
PDGFC-204ENST00000504672 TMC4Q7Z404 712 aa11.91□□□□□ -0.5
PDGFC-204ENST00000504672 EYA3Q99504 573 aa11.91□□□□□ -0.5
PDGFC-204ENST00000504672 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
PDGFC-204ENST00000504672 FKBP1BP68106 108 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
PDGFC-204ENST00000504672 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
PDGFC-204ENST00000504672 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
PDGFC-204ENST00000504672 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
PDGFC-204ENST00000504672 UFL1O94874 794 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 RPS8P62241 208 aaKnown RBP11.89□□□□□ -0.51
PDGFC-204ENST00000504672 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
PDGFC-204ENST00000504672 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 FZD1Q9UP38 647 aa11.89□□□□□ -0.51
PDGFC-204ENST00000504672 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
PDGFC-204ENST00000504672 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
PDGFC-204ENST00000504672 NEFMP07197 916 aa11.88□□□□□ -0.51
PDGFC-204ENST00000504672 GMLQ99445 158 aa11.88□□□□□ -0.51
PDGFC-204ENST00000504672 SEC31BQ9NQW1 1179 aa11.88□□□□□ -0.51
PDGFC-204ENST00000504672 KRT24Q2M2I5 525 aa11.87□□□□□ -0.51
PDGFC-204ENST00000504672 OTOP1Q7RTM1 612 aa11.87□□□□□ -0.51
PDGFC-204ENST00000504672 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
PDGFC-204ENST00000504672 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
PDGFC-204ENST00000504672 HTTP42858 3142 aa11.87□□□□□ -0.51
PDGFC-204ENST00000504672 TAF1P21675 1872 aa11.87□□□□□ -0.51
PDGFC-204ENST00000504672 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-204ENST00000504672 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
PDGFC-204ENST00000504672 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
PDGFC-204ENST00000504672 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-204ENST00000504672 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
PDGFC-204ENST00000504672 GGA1Q9UJY5 639 aa11.86□□□□□ -0.51
PDGFC-204ENST00000504672 CENPFP49454 3210 aa11.86□□□□□ -0.51
PDGFC-204ENST00000504672 AKAP11Q9UKA4 1901 aa11.86□□□□□ -0.51
PDGFC-204ENST00000504672 COL4A1P02462 1669 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
PDGFC-204ENST00000504672 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
PDGFC-204ENST00000504672 INTS3Q68E01 1043 aaKnown RBP11.85□□□□□ -0.51
PDGFC-204ENST00000504672 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
PDGFC-204ENST00000504672 SASH1O94885 1247 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 SPRYD7Q5W111 196 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
PDGFC-204ENST00000504672 CD99L2Q8TCZ2 262 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 ANGEL1Q9UNK9 670 aaKnown RBP11.84□□□□□ -0.51
PDGFC-204ENST00000504672 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
PDGFC-204ENST00000504672 SZT2Q5T011 3432 aa11.83□□□□□ -0.51
PDGFC-204ENST00000504672 H0YGN5 161 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 DLL1O00548 723 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 NF2P35240 595 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 CAP1Q01518 475 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 LDLRAD1Q5T700 205 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
PDGFC-204ENST00000504672 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDGFC-204ENST00000504672 WNT10BO00744 389 aa11.82□□□□□ -0.52
PDGFC-204ENST00000504672 RIPK4P57078 832 aa11.82□□□□□ -0.52
PDGFC-204ENST00000504672 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
PDGFC-204ENST00000504672 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
PDGFC-204ENST00000504672 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
PDGFC-204ENST00000504672 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
PDGFC-204ENST00000504672 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms