RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 ATP2B4P23634 1241 aa26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 LMOD1P29536 600 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 FOXO4P98177 505 aa26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 CXCL9Q07325 125 aa26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 TNIP1Q15025 636 aa26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 ZC3H12CQ9C0D7 883 aaKnown RBP26.76■■□□□ 1.87
TRAPPC11-203ENST00000504526 EPHX2P34913 555 aa26.75■■□□□ 1.87
TRAPPC11-203ENST00000504526 CIAPIN1Q6FI81 312 aa26.75■■□□□ 1.87
TRAPPC11-203ENST00000504526 PNMA8AQ86V59 439 aaPredicted RBP26.75■■□□□ 1.87
TRAPPC11-203ENST00000504526 MPHOSPH8Q99549 860 aa26.75■■□□□ 1.87
TRAPPC11-203ENST00000504526 UTYO14607 1347 aa26.74■■□□□ 1.87
TRAPPC11-203ENST00000504526 RIMBP2O15034 1052 aa26.74■■□□□ 1.87
TRAPPC11-203ENST00000504526 APLP1P51693 650 aa26.74■■□□□ 1.87
TRAPPC11-203ENST00000504526 MINPP1Q9UNW1 487 aa26.74■■□□□ 1.87
TRAPPC11-203ENST00000504526 RARSP54136 660 aaKnown RBP26.73■■□□□ 1.87
TRAPPC11-203ENST00000504526 IFIT5Q13325 482 aaKnown RBP26.73■■□□□ 1.87
TRAPPC11-203ENST00000504526 CHADLQ6NUI6 762 aa26.73■■□□□ 1.87
TRAPPC11-203ENST00000504526 LDHDQ86WU2 507 aa26.73■■□□□ 1.87
TRAPPC11-203ENST00000504526 LMBR1LQ6UX01 489 aa26.72■■□□□ 1.87
TRAPPC11-203ENST00000504526 API5Q9BZZ5 524 aaKnown RBP26.72■■□□□ 1.87
TRAPPC11-203ENST00000504526 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
TRAPPC11-203ENST00000504526 YDJCA8MPS7 323 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 G3V3G9 751 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 SCNN1DP51172 638 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 DCAF8Q5TAQ9 597 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 ANKRD2Q9GZV1 360 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 DBNDD1Q9H9R9 158 aa26.71■■□□□ 1.87
TRAPPC11-203ENST00000504526 KIF16BQ96L93 1317 aa26.7■■□□□ 1.87
TRAPPC11-203ENST00000504526 ECE2O60344 883 aa26.7■■□□□ 1.86
TRAPPC11-203ENST00000504526 RAD17O75943 681 aa26.7■■□□□ 1.86
TRAPPC11-203ENST00000504526 CCDC57Q2TAC2 916 aa26.7■■□□□ 1.86
TRAPPC11-203ENST00000504526 EPHA10Q5JZY3 1008 aa26.7■■□□□ 1.86
TRAPPC11-203ENST00000504526 NOB1Q9ULX3 412 aaKnown RBP26.7■■□□□ 1.86
TRAPPC11-203ENST00000504526 NBPF7P0C2Y1 421 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 CCT4P50991 539 aaKnown RBP26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 EAPPQ56P03 285 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 SUCLG2Q96I99 432 aa26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 GPR101Q96P66 508 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 LEMD3Q9Y2U8 911 aa26.69■■□□□ 1.86
TRAPPC11-203ENST00000504526 ZBED9Q6R2W3 1325 aa26.68■■□□□ 1.86
TRAPPC11-203ENST00000504526 DOK7Q18PE1 504 aa26.68■■□□□ 1.86
TRAPPC11-203ENST00000504526 ARHGAP45Q92619 1136 aa26.68■■□□□ 1.86
TRAPPC11-203ENST00000504526 GPRC5DQ9NZD1 345 aa26.68■■□□□ 1.86
TRAPPC11-203ENST00000504526 POTEIP0CG38 1075 aa26.67■■□□□ 1.86
TRAPPC11-203ENST00000504526 POTEJP0CG39 1038 aa26.67■■□□□ 1.86
TRAPPC11-203ENST00000504526 GMPSP49915 693 aaPredicted RBP26.67■■□□□ 1.86
TRAPPC11-203ENST00000504526 TAF7LQ5H9L4 462 aa26.67■■□□□ 1.86
TRAPPC11-203ENST00000504526 MED23Q9ULK4 1368 aa26.67■■□□□ 1.86
TRAPPC11-203ENST00000504526 EPS15P42566 896 aa26.66■■□□□ 1.86
TRAPPC11-203ENST00000504526 USP50Q70EL3 339 aaPredicted RBP26.66■■□□□ 1.86
TRAPPC11-203ENST00000504526 CLEC11AQ9Y240 323 aa26.66■■□□□ 1.86
TRAPPC11-203ENST00000504526 SPEF2Q9C093 1822 aa26.66■■□□□ 1.86
TRAPPC11-203ENST00000504526 KAZALD1Q96I82 304 aa26.65■■□□□ 1.86
TRAPPC11-203ENST00000504526 USP44Q9H0E7 712 aa26.65■■□□□ 1.86
TRAPPC11-203ENST00000504526 ADARB2Q9NS39 739 aaKnown RBP26.65■■□□□ 1.86
TRAPPC11-203ENST00000504526 IPO8O15397 1037 aaKnown RBP26.64■■□□□ 1.86
TRAPPC11-203ENST00000504526 RPS12P25398 132 aaKnown RBP26.64■■□□□ 1.86
TRAPPC11-203ENST00000504526 CHRNDQ07001 517 aa26.64■■□□□ 1.86
TRAPPC11-203ENST00000504526 RABL6Q3YEC7 729 aaPredicted RBP26.64■■□□□ 1.86
TRAPPC11-203ENST00000504526 DPF2Q92785 391 aa26.64■■□□□ 1.86
TRAPPC11-203ENST00000504526 PSMD14O00487 310 aa26.63■■□□□ 1.85
TRAPPC11-203ENST00000504526 PODNQ7Z5L7 613 aa26.63■■□□□ 1.85
TRAPPC11-203ENST00000504526 ADAMTSL1Q8N6G6 1762 aa26.63■■□□□ 1.85
TRAPPC11-203ENST00000504526 ZNF804BA4D1E1 1349 aa26.63■■□□□ 1.85
TRAPPC11-203ENST00000504526 KCNJ4P48050 445 aa26.62■■□□□ 1.85
TRAPPC11-203ENST00000504526 LDHAL6AQ6ZMR3 332 aa26.62■■□□□ 1.85
TRAPPC11-203ENST00000504526 BICC1Q9H694 974 aaKnown RBP26.62■■□□□ 1.85
TRAPPC11-203ENST00000504526 HDAC5Q9UQL6 1122 aa26.61■■□□□ 1.85
TRAPPC11-203ENST00000504526 H7C1D1 291 aa26.6■■□□□ 1.85
TRAPPC11-203ENST00000504526 VIL1P09327 827 aaKnown RBP26.6■■□□□ 1.85
TRAPPC11-203ENST00000504526 COA1Q9GZY4 146 aa26.6■■□□□ 1.85
TRAPPC11-203ENST00000504526 CNNM1Q9NRU3 951 aa26.6■■□□□ 1.85
TRAPPC11-203ENST00000504526 CNOT7Q9UIV1 285 aaKnown RBP26.6■■□□□ 1.85
TRAPPC11-203ENST00000504526 ANKRD44Q8N8A2 993 aa26.59■■□□□ 1.85
TRAPPC11-203ENST00000504526 ZNF594Q96JF6 807 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC11-203ENST00000504526 ZBTB12Q9Y330 459 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC11-203ENST00000504526 WTIPA6NIX2 430 aaPredicted RBP26.58■■□□□ 1.85
TRAPPC11-203ENST00000504526 UBTFL1P0CB47 393 aaPredicted RBP26.58■■□□□ 1.85
TRAPPC11-203ENST00000504526 KCNQ5Q9NR82 932 aa26.58■■□□□ 1.85
TRAPPC11-203ENST00000504526 INTS3Q68E01 1043 aaKnown RBP26.57■■□□□ 1.84
TRAPPC11-203ENST00000504526 MICALL2Q8IY33 904 aa26.57■■□□□ 1.84
TRAPPC11-203ENST00000504526 CNTROBQ8N137 903 aa26.57■■□□□ 1.84
TRAPPC11-203ENST00000504526 ZNF609O15014 1411 aa26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 BCAR3O75815 825 aa26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 ITGBL1O95965 494 aaPredicted RBP26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 MAP1SQ66K74 1059 aaPredicted RBP26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 ATF7IPQ6VMQ6 1270 aa26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 C15orf52Q6ZUT6 534 aaKnown RBP26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 AGBL3Q8NEM8 1001 aa26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 PASKQ96RG2 1323 aa26.56■■□□□ 1.84
TRAPPC11-203ENST00000504526 USP17L3A6NCW0 530 aa26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 USP17L4A6NCW7 530 aa26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 TAF5LO75529 589 aa26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 RSBN1LQ6PCB5 846 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 USP17L1Q7RTZ2 530 aa26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 HELBQ8NG08 1087 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 ZC3H15Q8WU90 426 aaKnown RBP26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 FRAT1Q92837 279 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC11-203ENST00000504526 TXNRD3Q86VQ6 643 aa26.54■■□□□ 1.84
TRAPPC11-203ENST00000504526 SCN9AQ15858 1988 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms