RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ZC3H12CQ9C0D7 883 aaKnown RBP9.78□□□□□ -0.84
SKP2-203ENST00000504386 GREM2Q9H772 168 aa9.78□□□□□ -0.84
SKP2-203ENST00000504386 SNED1Q8TER0 1413 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 FZD9O00144 591 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 UFL1O94874 794 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
SKP2-203ENST00000504386 KCNJ4P48050 445 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
SKP2-203ENST00000504386 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
SKP2-203ENST00000504386 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
SKP2-203ENST00000504386 SEC31BQ9NQW1 1179 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 LEMD3Q9Y2U8 911 aa9.77□□□□□ -0.85
SKP2-203ENST00000504386 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
SKP2-203ENST00000504386 PNMA8AQ86V59 439 aaPredicted RBP9.76□□□□□ -0.85
SKP2-203ENST00000504386 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
SKP2-203ENST00000504386 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
SKP2-203ENST00000504386 CCDC85AQ96PX6 553 aaPredicted RBP9.76□□□□□ -0.85
SKP2-203ENST00000504386 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
SKP2-203ENST00000504386 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
SKP2-203ENST00000504386 SBF1O95248 1867 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 TOMM70O94826 608 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 NBPF7P0C2Y1 421 aaPredicted RBP9.75□□□□□ -0.85
SKP2-203ENST00000504386 MMP14P50281 582 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 GPSM2P81274 684 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 FOXO4P98177 505 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 AOC3Q16853 763 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 RABL6Q3YEC7 729 aaPredicted RBP9.75□□□□□ -0.85
SKP2-203ENST00000504386 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
SKP2-203ENST00000504386 TBC1D16Q8TBP0 767 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
SKP2-203ENST00000504386 USP44Q9H0E7 712 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 CNNM1Q9NRU3 951 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 MYH3P11055 1940 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 LRRC37AA6NMS7 1700 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
SKP2-203ENST00000504386 DICER1Q9UPY3 1922 aaKnown RBP9.74□□□□□ -0.85
SKP2-203ENST00000504386 TIAM2Q8IVF5 1701 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 TRIM27P14373 513 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 RPS12P25398 132 aaKnown RBP9.74□□□□□ -0.85
SKP2-203ENST00000504386 FSTL1Q12841 308 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 CIAPIN1Q6FI81 312 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 SMC1BQ8NDV3 1235 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 SUCLG2Q96I99 432 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 HACL1Q9UJ83 578 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 MINPP1Q9UNW1 487 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 MROH5Q6ZUA9 1318 aa9.74□□□□□ -0.85
SKP2-203ENST00000504386 BCAR3O75815 825 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 PRELPP51888 382 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 COA1Q9GZY4 146 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
SKP2-203ENST00000504386 RRAGCQ9HB90 399 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 NMRK2Q9NPI5 230 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 ZNF804BA4D1E1 1349 aa9.73□□□□□ -0.85
SKP2-203ENST00000504386 KIF3CO14782 793 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 ECE2O60344 883 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 DDNO94850 711 aaPredicted RBP9.72□□□□□ -0.85
SKP2-203ENST00000504386 GNAI2P04899 355 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 C1QTNF8P60827 252 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 CHRNDQ07001 517 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 UBE4AQ14139 1066 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 C15orf52Q6ZUT6 534 aaKnown RBP9.72□□□□□ -0.85
SKP2-203ENST00000504386 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 GJA3Q9Y6H8 435 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 WDR90Q96KV7 1748 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 MYO3BQ8WXR4 1341 aa9.72□□□□□ -0.85
SKP2-203ENST00000504386 H7C1D1 291 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 CIAO1O76071 339 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 DPF2Q92785 391 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 ZNF541Q9H0D2 1346 aa9.71□□□□□ -0.86
SKP2-203ENST00000504386 EPHX2P34913 555 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 CXCL9Q07325 125 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 MTX1Q13505 466 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 METTL24Q5JXM2 366 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 EPHA10Q5JZY3 1008 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 USP50Q70EL3 339 aaPredicted RBP9.7□□□□□ -0.86
SKP2-203ENST00000504386 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 TAF1DQ9H5J8 278 aaPredicted RBP9.7□□□□□ -0.86
SKP2-203ENST00000504386 DBNDD1Q9H9R9 158 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 DDX19BQ9UMR2 479 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 DUOX1Q9NRD9 1551 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 CCDC88AQ3V6T2 1871 aa9.7□□□□□ -0.86
SKP2-203ENST00000504386 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
SKP2-203ENST00000504386 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
SKP2-203ENST00000504386 EYA2O00167 538 aa9.69□□□□□ -0.86
SKP2-203ENST00000504386 ZNF609O15014 1411 aa9.69□□□□□ -0.86
SKP2-203ENST00000504386 IFIT1P09914 478 aaKnown RBP9.69□□□□□ -0.86
SKP2-203ENST00000504386 SCN4AP35499 1836 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms