RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 KCNQ5Q9NR82 932 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 HIRAP54198 1017 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-211ENST00000504318 USP50Q70EL3 339 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-211ENST00000504318 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
PDLIM7-211ENST00000504318 DBNDD1Q9H9R9 158 aa17.9■□□□□ 0.46
PDLIM7-211ENST00000504318 PGAP2Q9UHJ9 254 aa17.9■□□□□ 0.46
PDLIM7-211ENST00000504318 ZNF609O15014 1411 aa17.89■□□□□ 0.46
PDLIM7-211ENST00000504318 LMOD1P29536 600 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-211ENST00000504318 FMR1Q06787 632 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDLIM7-211ENST00000504318 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
PDLIM7-211ENST00000504318 PSMD14O00487 310 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 ECE2O60344 883 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 ANKRD18AQ8IVF6 992 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 TRPM4Q8TD43 1214 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 ADARB2Q9NS39 739 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 MINPP1Q9UNW1 487 aa17.88■□□□□ 0.45
PDLIM7-211ENST00000504318 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 UFL1O94874 794 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 TNIP1Q15025 636 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 EYA3Q99504 573 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 XDHP47989 1333 aa17.87■□□□□ 0.45
PDLIM7-211ENST00000504318 EGFRP00533 1210 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 FOXO4P98177 505 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 DPF2Q92785 391 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 GGA1Q9UJY5 639 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 THSD7BQ9C0I4 1608 aa17.86■□□□□ 0.45
PDLIM7-211ENST00000504318 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 VIL1P09327 827 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 POLR2AP24928 1970 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 EPHA10Q5JZY3 1008 aa17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 CNOT7Q9UIV1 285 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 IRS2Q9Y4H2 1338 aa17.85■□□□□ 0.45
PDLIM7-211ENST00000504318 MED23Q9ULK4 1368 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 ITGA6P23229 1130 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 CST9Q5W186 159 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 MICALL2Q8IY33 904 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 ANKIB1Q9P2G1 1089 aa17.84■□□□□ 0.45
PDLIM7-211ENST00000504318 RASSF10A6NK89 507 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 E9PSI1 815 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 TRAF5O00463 557 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 ATP2B4P23634 1241 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 KAZALD1Q96I82 304 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 GMLQ99445 158 aa17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-211ENST00000504318 RPS12P25398 132 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-211ENST00000504318 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
PDLIM7-211ENST00000504318 ZC3H15Q8WU90 426 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-211ENST00000504318 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
PDLIM7-211ENST00000504318 ZC3H12CQ9C0D7 883 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-211ENST00000504318 UTYO14607 1347 aa17.81■□□□□ 0.44
PDLIM7-211ENST00000504318 KLRK1P26718 216 aa17.81■□□□□ 0.44
PDLIM7-211ENST00000504318 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-211ENST00000504318 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
PDLIM7-211ENST00000504318 GRM8O00222 908 aa17.8■□□□□ 0.44
PDLIM7-211ENST00000504318 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
PDLIM7-211ENST00000504318 VEGFBP49765 207 aa17.8■□□□□ 0.44
PDLIM7-211ENST00000504318 SSH1Q8WYL5 1049 aa17.8■□□□□ 0.44
PDLIM7-211ENST00000504318 GLIS2Q9BZE0 524 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-211ENST00000504318 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-211ENST00000504318 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 IGHMBP2P38935 993 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 CHRNDQ07001 517 aa17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 LEMD3Q9Y2U8 911 aa17.78■□□□□ 0.44
PDLIM7-211ENST00000504318 H7C1D1 291 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 SNAP23O00161 211 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 DLK2Q6UY11 383 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 AGBL3Q8NEM8 1001 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 SUCLG2Q96I99 432 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
PDLIM7-211ENST00000504318 ASTN2O75129 1339 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 PTPRCP08575 1304 aa17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 DACT2Q5SW24 774 aa17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 TLL2Q9Y6L7 1015 aa17.76■□□□□ 0.43
PDLIM7-211ENST00000504318 ZNF804BA4D1E1 1349 aa17.75■□□□□ 0.43
PDLIM7-211ENST00000504318 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
PDLIM7-211ENST00000504318 RABL6Q3YEC7 729 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-211ENST00000504318 COL13A1Q5TAT6 717 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-211ENST00000504318 SLC4A10Q6U841 1118 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms