RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 CSF1RP07333 972 aa22.63■■□□□ 1.21
NFKB1-204ENST00000504044 IFIT5Q13325 482 aaKnown RBP22.63■■□□□ 1.21
NFKB1-204ENST00000504044 EAPPQ56P03 285 aaPredicted RBP22.63■■□□□ 1.21
NFKB1-204ENST00000504044 POLLQ9UGP5 575 aa22.63■■□□□ 1.21
NFKB1-204ENST00000504044 BCL2L13Q9BXK5 485 aa22.62■■□□□ 1.21
NFKB1-204ENST00000504044 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
NFKB1-204ENST00000504044 CLEC11AQ9Y240 323 aa22.62■■□□□ 1.21
NFKB1-204ENST00000504044 LRRC37AA6NMS7 1700 aa22.62■■□□□ 1.21
NFKB1-204ENST00000504044 RIMBP2O15034 1052 aa22.61■■□□□ 1.21
NFKB1-204ENST00000504044 CXCL9Q07325 125 aa22.61■■□□□ 1.21
NFKB1-204ENST00000504044 CCDC57Q2TAC2 916 aa22.61■■□□□ 1.21
NFKB1-204ENST00000504044 FAM161AQ3B820 660 aa22.61■■□□□ 1.21
NFKB1-204ENST00000504044 TAF7LQ5H9L4 462 aa22.61■■□□□ 1.21
NFKB1-204ENST00000504044 API5Q9BZZ5 524 aaKnown RBP22.6■■□□□ 1.21
NFKB1-204ENST00000504044 KIF16BQ96L93 1317 aa22.59■■□□□ 1.21
NFKB1-204ENST00000504044 RAD17O75943 681 aa22.59■■□□□ 1.21
NFKB1-204ENST00000504044 MINPP1Q9UNW1 487 aa22.59■■□□□ 1.21
NFKB1-204ENST00000504044 SCN4AP35499 1836 aa22.59■■□□□ 1.21
NFKB1-204ENST00000504044 ECE2O60344 883 aa22.58■■□□□ 1.21
NFKB1-204ENST00000504044 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
NFKB1-204ENST00000504044 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.21
NFKB1-204ENST00000504044 USP50Q70EL3 339 aaPredicted RBP22.58■■□□□ 1.21
NFKB1-204ENST00000504044 DBNDD1Q9H9R9 158 aa22.58■■□□□ 1.21
NFKB1-204ENST00000504044 HDAC5Q9UQL6 1122 aa22.58■■□□□ 1.21
NFKB1-204ENST00000504044 LEMD3Q9Y2U8 911 aa22.58■■□□□ 1.21
NFKB1-204ENST00000504044 COL4A5P29400 1685 aa22.58■■□□□ 1.2
NFKB1-204ENST00000504044 KCNJ4P48050 445 aa22.57■■□□□ 1.2
NFKB1-204ENST00000504044 CCT4P50991 539 aaKnown RBP22.57■■□□□ 1.2
NFKB1-204ENST00000504044 SCNN1DP51172 638 aa22.57■■□□□ 1.2
NFKB1-204ENST00000504044 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
NFKB1-204ENST00000504044 DUOX1Q9NRD9 1551 aa22.56■■□□□ 1.2
NFKB1-204ENST00000504044 RPS12P25398 132 aaKnown RBP22.56■■□□□ 1.2
NFKB1-204ENST00000504044 FOXO4P98177 505 aa22.56■■□□□ 1.2
NFKB1-204ENST00000504044 GPRC5DQ9NZD1 345 aa22.56■■□□□ 1.2
NFKB1-204ENST00000504044 H7C1D1 291 aa22.55■■□□□ 1.2
NFKB1-204ENST00000504044 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
NFKB1-204ENST00000504044 GMPSP49915 693 aaPredicted RBP22.55■■□□□ 1.2
NFKB1-204ENST00000504044 DOK7Q18PE1 504 aa22.55■■□□□ 1.2
NFKB1-204ENST00000504044 UTYO14607 1347 aa22.55■■□□□ 1.2
NFKB1-204ENST00000504044 MED23Q9ULK4 1368 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 YDJCA8MPS7 323 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 EPS15P42566 896 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
NFKB1-204ENST00000504044 PODNQ7Z5L7 613 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 DPF2Q92785 391 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 NOB1Q9ULX3 412 aaKnown RBP22.54■■□□□ 1.2
NFKB1-204ENST00000504044 TAF1P21675 1872 aa22.54■■□□□ 1.2
NFKB1-204ENST00000504044 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
NFKB1-204ENST00000504044 MYH3P11055 1940 aa22.53■■□□□ 1.2
NFKB1-204ENST00000504044 PSMD14O00487 310 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 NBPF7P0C2Y1 421 aaPredicted RBP22.52■■□□□ 1.2
NFKB1-204ENST00000504044 POTEIP0CG38 1075 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 POTEJP0CG39 1038 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 CHRNDQ07001 517 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 LDHAL6AQ6ZMR3 332 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 SUCLG2Q96I99 432 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 GPR101Q96P66 508 aaPredicted RBP22.52■■□□□ 1.2
NFKB1-204ENST00000504044 CNNM1Q9NRU3 951 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 ZNF804BA4D1E1 1349 aa22.52■■□□□ 1.2
NFKB1-204ENST00000504044 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
NFKB1-204ENST00000504044 COL4A1P02462 1669 aa22.5■■□□□ 1.19
NFKB1-204ENST00000504044 CNOT7Q9UIV1 285 aaKnown RBP22.5■■□□□ 1.19
NFKB1-204ENST00000504044 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
NFKB1-204ENST00000504044 EPHA10Q5JZY3 1008 aa22.49■■□□□ 1.19
NFKB1-204ENST00000504044 MICALL2Q8IY33 904 aa22.49■■□□□ 1.19
NFKB1-204ENST00000504044 CNTROBQ8N137 903 aa22.49■■□□□ 1.19
NFKB1-204ENST00000504044 LTBP1Q14766 1721 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 USP17L3A6NCW0 530 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 USP17L4A6NCW7 530 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 VIL1P09327 827 aaKnown RBP22.48■■□□□ 1.19
NFKB1-204ENST00000504044 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
NFKB1-204ENST00000504044 USP17L1Q7RTZ2 530 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 AGBL3Q8NEM8 1001 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 ZC3H15Q8WU90 426 aaKnown RBP22.48■■□□□ 1.19
NFKB1-204ENST00000504044 USP44Q9H0E7 712 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 BICC1Q9H694 974 aaKnown RBP22.48■■□□□ 1.19
NFKB1-204ENST00000504044 CREBZFQ9NS37 354 aa22.48■■□□□ 1.19
NFKB1-204ENST00000504044 RABL6Q3YEC7 729 aaPredicted RBP22.47■■□□□ 1.19
NFKB1-204ENST00000504044 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
NFKB1-204ENST00000504044 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
NFKB1-204ENST00000504044 MYO3BQ8WXR4 1341 aa22.46■■□□□ 1.19
NFKB1-204ENST00000504044 RSBN1LQ6PCB5 846 aaPredicted RBP22.45■■□□□ 1.18
NFKB1-204ENST00000504044 ZNF804AQ7Z570 1209 aa22.45■■□□□ 1.18
NFKB1-204ENST00000504044 MROH5Q6ZUA9 1318 aa22.45■■□□□ 1.18
NFKB1-204ENST00000504044 PASKQ96RG2 1323 aa22.45■■□□□ 1.18
NFKB1-204ENST00000504044 TMEM88BA6NKF7 163 aa22.44■■□□□ 1.18
NFKB1-204ENST00000504044 ITGBL1O95965 494 aaPredicted RBP22.44■■□□□ 1.18
NFKB1-204ENST00000504044 MMP14P50281 582 aa22.44■■□□□ 1.18
NFKB1-204ENST00000504044 C15orf52Q6ZUT6 534 aaKnown RBP22.44■■□□□ 1.18
NFKB1-204ENST00000504044 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
NFKB1-204ENST00000504044 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
NFKB1-204ENST00000504044 KLRG1Q96E93 195 aa22.44■■□□□ 1.18
NFKB1-204ENST00000504044 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
NFKB1-204ENST00000504044 PLIN1O60240 522 aa22.43■■□□□ 1.18
NFKB1-204ENST00000504044 GNAI3P08754 354 aa22.43■■□□□ 1.18
NFKB1-204ENST00000504044 STRIP1Q5VSL9 837 aa22.43■■□□□ 1.18
NFKB1-204ENST00000504044 KAZALD1Q96I82 304 aa22.43■■□□□ 1.18
NFKB1-204ENST00000504044 ZNF609O15014 1411 aa22.42■■□□□ 1.18
NFKB1-204ENST00000504044 TAF5LO75529 589 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms