RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 UBAP1LF5GYI3 381 aa8.23□□□□□ -1.09
SUB1-204ENST00000504016 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
SUB1-204ENST00000504016 ATG7O95352 703 aa8.23□□□□□ -1.09
SUB1-204ENST00000504016 NOS3P29474 1203 aa8.23□□□□□ -1.09
SUB1-204ENST00000504016 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
SUB1-204ENST00000504016 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
SUB1-204ENST00000504016 ZFP64Q9NPA5 681 aa8.23□□□□□ -1.09
SUB1-204ENST00000504016 DLL1O00548 723 aa8.22□□□□□ -1.09
SUB1-204ENST00000504016 TRIP4Q15650 581 aaPredicted RBP8.22□□□□□ -1.09
SUB1-204ENST00000504016 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
SUB1-204ENST00000504016 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
SUB1-204ENST00000504016 TNFRSF10BO14763 440 aa8.21□□□□□ -1.1
SUB1-204ENST00000504016 HOXD8P13378 290 aaPredicted RBP8.21□□□□□ -1.1
SUB1-204ENST00000504016 FNDC3AQ9Y2H6 1198 aaKnown RBP8.21□□□□□ -1.1
SUB1-204ENST00000504016 ZAP70P43403 619 aa8.2□□□□□ -1.1
SUB1-204ENST00000504016 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
SUB1-204ENST00000504016 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
SUB1-204ENST00000504016 STIM2Q9P246 746 aa8.2□□□□□ -1.1
SUB1-204ENST00000504016 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
SUB1-204ENST00000504016 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
SUB1-204ENST00000504016 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
SUB1-204ENST00000504016 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
SUB1-204ENST00000504016 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
SUB1-204ENST00000504016 CLP1Q92989 425 aaKnown RBP8.19□□□□□ -1.1
SUB1-204ENST00000504016 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
SUB1-204ENST00000504016 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
SUB1-204ENST00000504016 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
SUB1-204ENST00000504016 ALX3O95076 343 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 HYAL2Q12891 473 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 MAP4K3Q8IVH8 894 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 CCDC97Q96F63 343 aaPredicted RBP8.18□□□□□ -1.1
SUB1-204ENST00000504016 MUC3BQ9H195 1237 aa8.18□□□□□ -1.1
SUB1-204ENST00000504016 SCNN1AP37088 669 aa8.17□□□□□ -1.1
SUB1-204ENST00000504016 TMEM130Q8N3G9 435 aa8.17□□□□□ -1.1
SUB1-204ENST00000504016 ABTB2Q8N961 1025 aa8.17□□□□□ -1.1
SUB1-204ENST00000504016 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
SUB1-204ENST00000504016 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
SUB1-204ENST00000504016 F8W735 103 aaPredicted RBP8.16□□□□□ -1.1
SUB1-204ENST00000504016 ZBTB39O15060 712 aa8.16□□□□□ -1.1
SUB1-204ENST00000504016 LRP8Q14114 963 aa8.16□□□□□ -1.1
SUB1-204ENST00000504016 COL13A1Q5TAT6 717 aaPredicted RBP8.16□□□□□ -1.1
SUB1-204ENST00000504016 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
SUB1-204ENST00000504016 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
SUB1-204ENST00000504016 SMNDC1O75940 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
SUB1-204ENST00000504016 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
SUB1-204ENST00000504016 ATP11AP98196 1134 aa8.15□□□□□ -1.1
SUB1-204ENST00000504016 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.1
SUB1-204ENST00000504016 DZIP1LQ8IYY4 767 aaKnown RBP8.15□□□□□ -1.1
SUB1-204ENST00000504016 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
SUB1-204ENST00000504016 ABI2Q9NYB9 513 aaPredicted RBP8.15□□□□□ -1.1
SUB1-204ENST00000504016 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
SUB1-204ENST00000504016 ARID3AQ99856 593 aa8.14□□□□□ -1.11
SUB1-204ENST00000504016 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
SUB1-204ENST00000504016 SERPINA10Q9UK55 444 aa8.14□□□□□ -1.11
SUB1-204ENST00000504016 HYAL3O43820 417 aaPredicted RBP8.13□□□□□ -1.11
SUB1-204ENST00000504016 GLB1P16278 677 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 CDC27P30260 824 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 CDC25BP30305 580 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 RASSF4Q9H2L5 321 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
SUB1-204ENST00000504016 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
SUB1-204ENST00000504016 TXNDC11Q6PKC3 985 aa8.12□□□□□ -1.11
SUB1-204ENST00000504016 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
SUB1-204ENST00000504016 AGGF1Q8N302 714 aaeCLIP8.12□□□□□ -1.11
SUB1-204ENST00000504016 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
SUB1-204ENST00000504016 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
SUB1-204ENST00000504016 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 KIF4AO95239 1232 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
SUB1-204ENST00000504016 ATCAYQ86WG3 371 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 ELP3Q9H9T3 547 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 RNF112Q9ULX5 631 aa8.11□□□□□ -1.11
SUB1-204ENST00000504016 CD68P34810 354 aaPredicted RBP8.1□□□□□ -1.11
SUB1-204ENST00000504016 FAM117BQ6P1L5 589 aa8.1□□□□□ -1.11
SUB1-204ENST00000504016 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
SUB1-204ENST00000504016 ZNF438Q7Z4V0 828 aa8.1□□□□□ -1.11
SUB1-204ENST00000504016 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
SUB1-204ENST00000504016 RPLP1P05386 114 aaKnown RBP8.09□□□□□ -1.11
SUB1-204ENST00000504016 FSTP19883 344 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 CEP120Q8N960 986 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 CARD10Q9BWT7 1032 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
SUB1-204ENST00000504016 FSCN2O14926 492 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 PCSK2P16519 638 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 PTPRAP18433 802 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 DNM1Q05193 864 aaKnown RBP8.08□□□□□ -1.12
SUB1-204ENST00000504016 Q6ZS46 218 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 ACAD11Q709F0 780 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 SH2B1Q9NRF2 756 aaPredicted RBP8.08□□□□□ -1.12
SUB1-204ENST00000504016 KANSL3Q9P2N6 904 aa8.08□□□□□ -1.12
SUB1-204ENST00000504016 WISP1O95388 367 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms