RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RTFDC1Q9BY42 306 aaPredicted RBP13.89□□□□□ -0.19
VCAN-205ENST00000503923 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 MINPP1Q9UNW1 487 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 XDHP47989 1333 aa13.89□□□□□ -0.19
VCAN-205ENST00000503923 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
VCAN-205ENST00000503923 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
VCAN-205ENST00000503923 VPS33BQ9H267 617 aa13.88□□□□□ -0.19
VCAN-205ENST00000503923 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
VCAN-205ENST00000503923 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
VCAN-205ENST00000503923 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
VCAN-205ENST00000503923 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
VCAN-205ENST00000503923 PRELPP51888 382 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
VCAN-205ENST00000503923 CHRNDQ07001 517 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 TBC1D16Q8TBP0 767 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 EYA3Q99504 573 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 ZNF277Q9NRM2 450 aaPredicted RBP13.87□□□□□ -0.19
VCAN-205ENST00000503923 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
VCAN-205ENST00000503923 C6orf229H3BNL8 230 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 EYA2O00167 538 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 UFL1O94874 794 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
VCAN-205ENST00000503923 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 LEMD3Q9Y2U8 911 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 MROH5Q6ZUA9 1318 aa13.86□□□□□ -0.19
VCAN-205ENST00000503923 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
VCAN-205ENST00000503923 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
VCAN-205ENST00000503923 PPIP5K2O43314 1243 aa13.85□□□□□ -0.19
VCAN-205ENST00000503923 LRRC24Q50LG9 513 aa13.85□□□□□ -0.19
VCAN-205ENST00000503923 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
VCAN-205ENST00000503923 LARGE2Q8N3Y3 721 aa13.85□□□□□ -0.19
VCAN-205ENST00000503923 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
VCAN-205ENST00000503923 A0A1B0GUL6 1792 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 CIAO1O76071 339 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 KCNJ4P48050 445 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 KIAA2012Q0VF49 1180 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 POLA2Q14181 598 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 AOC3Q16853 763 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 WASHC4Q2M389 1173 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 METTL24Q5JXM2 366 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
VCAN-205ENST00000503923 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 JDP2Q8WYK2 163 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 CRBNQ96SW2 442 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 SIL1Q9H173 461 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 PA2G4Q9UQ80 394 aaKnown RBP13.84□□□□□ -0.19
VCAN-205ENST00000503923 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
VCAN-205ENST00000503923 TAF5LO75529 589 aa13.83□□□□□ -0.2
VCAN-205ENST00000503923 IL15P40933 162 aaPredicted RBP13.83□□□□□ -0.2
VCAN-205ENST00000503923 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
VCAN-205ENST00000503923 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
VCAN-205ENST00000503923 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
VCAN-205ENST00000503923 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
VCAN-205ENST00000503923 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
VCAN-205ENST00000503923 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
VCAN-205ENST00000503923 HMMRO75330 724 aa13.82□□□□□ -0.2
VCAN-205ENST00000503923 YY1P25490 414 aa13.82□□□□□ -0.2
VCAN-205ENST00000503923 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
VCAN-205ENST00000503923 GPR101Q96P66 508 aaPredicted RBP13.82□□□□□ -0.2
VCAN-205ENST00000503923 PDE8BO95263 885 aa13.81□□□□□ -0.2
VCAN-205ENST00000503923 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
VCAN-205ENST00000503923 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
VCAN-205ENST00000503923 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
VCAN-205ENST00000503923 COL4A5P29400 1685 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
VCAN-205ENST00000503923 G3V3G9 751 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 FZD9O00144 591 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
VCAN-205ENST00000503923 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
VCAN-205ENST00000503923 AAMPQ13685 434 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
VCAN-205ENST00000503923 CEP126Q9P2H0 1117 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
VCAN-205ENST00000503923 SNAP23O00161 211 aa13.79□□□□□ -0.2
VCAN-205ENST00000503923 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
VCAN-205ENST00000503923 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
VCAN-205ENST00000503923 PUM3Q15397 648 aaKnown RBP13.79□□□□□ -0.2
VCAN-205ENST00000503923 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
VCAN-205ENST00000503923 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
VCAN-205ENST00000503923 ECE2O60344 883 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 KLRK1P26718 216 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 SIRT2Q8IXJ6 389 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
VCAN-205ENST00000503923 DBNDD1Q9H9R9 158 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms