RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 TBC1D16Q8TBP0 767 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
PROM1-204ENST00000503884 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 IFT57Q9NWB7 429 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 NSFL1CQ9UNZ2 370 aaKnown RBP11.68□□□□□ -0.54
PROM1-204ENST00000503884 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
PROM1-204ENST00000503884 ZNF609O15014 1411 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
PROM1-204ENST00000503884 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
PROM1-204ENST00000503884 MYH3P11055 1940 aa11.67□□□□□ -0.54
PROM1-204ENST00000503884 H7C1D1 291 aa11.67□□□□□ -0.54
PROM1-204ENST00000503884 EGFRP00533 1210 aa11.67□□□□□ -0.54
PROM1-204ENST00000503884 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
PROM1-204ENST00000503884 APAF1O14727 1248 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 ECE2O60344 883 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 PCCAP05165 728 aaPredicted RBP11.66□□□□□ -0.54
PROM1-204ENST00000503884 RPS12P25398 132 aaKnown RBP11.66□□□□□ -0.54
PROM1-204ENST00000503884 GNAI1P63096 354 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 POLA2Q14181 598 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
PROM1-204ENST00000503884 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
PROM1-204ENST00000503884 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 ABHD8Q96I13 439 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
PROM1-204ENST00000503884 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.54
PROM1-204ENST00000503884 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
PROM1-204ENST00000503884 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 DLK2Q6UY11 383 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 EYA3Q99504 573 aa11.65□□□□□ -0.54
PROM1-204ENST00000503884 CA12O43570 354 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 PDE8AO60658 829 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 GRM1Q13255 1194 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 TBC1D10BQ4KMP7 808 aaPredicted RBP11.64□□□□□ -0.55
PROM1-204ENST00000503884 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 MYD88Q99836 296 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
PROM1-204ENST00000503884 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
PROM1-204ENST00000503884 FAM155AB1AL88 458 aaPredicted RBP11.63□□□□□ -0.55
PROM1-204ENST00000503884 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
PROM1-204ENST00000503884 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
PROM1-204ENST00000503884 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
PROM1-204ENST00000503884 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
PROM1-204ENST00000503884 ZNF408Q9H9D4 720 aa11.63□□□□□ -0.55
PROM1-204ENST00000503884 TSKSQ9UJT2 592 aa11.63□□□□□ -0.55
PROM1-204ENST00000503884 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
PROM1-204ENST00000503884 CACNA1FO60840 1977 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 RGS19P49795 217 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 HUNKP57058 714 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 ZNF280AP59817 542 aaPredicted RBP11.62□□□□□ -0.55
PROM1-204ENST00000503884 NOGQ13253 232 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 GMLQ99445 158 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
PROM1-204ENST00000503884 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
PROM1-204ENST00000503884 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 ANP32CO43423 234 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 UFL1O94874 794 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 IGKV5-2P06315 115 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 AGBL3Q8NEM8 1001 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 JARID2Q92833 1246 aaPredicted RBP11.61□□□□□ -0.55
PROM1-204ENST00000503884 GBA2Q9HCG7 927 aaPredicted RBP11.61□□□□□ -0.55
PROM1-204ENST00000503884 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
PROM1-204ENST00000503884 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
PROM1-204ENST00000503884 XDHP47989 1333 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
PROM1-204ENST00000503884 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 RSBN1LQ6PCB5 846 aaPredicted RBP11.6□□□□□ -0.55
PROM1-204ENST00000503884 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
PROM1-204ENST00000503884 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
PROM1-204ENST00000503884 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
PROM1-204ENST00000503884 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
PROM1-204ENST00000503884 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 CTSWP56202 376 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 PODNQ7Z5L7 613 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 C2orf69Q8N8R5 385 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
PROM1-204ENST00000503884 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
PROM1-204ENST00000503884 TNRC18O15417 2968 aaPredicted RBP11.59□□□□□ -0.55
PROM1-204ENST00000503884 H7C1W4 665 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms