RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 TBC1D16Q8TBP0 767 aa26■■□□□ 1.75
PDGFRA-203ENST00000503856 MINPP1Q9UNW1 487 aa26■■□□□ 1.75
PDGFRA-203ENST00000503856 WASHC4Q2M389 1173 aa25.99■■□□□ 1.75
PDGFRA-203ENST00000503856 MPHOSPH8Q99549 860 aa25.99■■□□□ 1.75
PDGFRA-203ENST00000503856 BICC1Q9H694 974 aaKnown RBP25.99■■□□□ 1.75
PDGFRA-203ENST00000503856 XDHP47989 1333 aa25.98■■□□□ 1.75
PDGFRA-203ENST00000503856 RIMBP2O15034 1052 aa25.98■■□□□ 1.75
PDGFRA-203ENST00000503856 EIF6P56537 245 aaKnown RBP25.98■■□□□ 1.75
PDGFRA-203ENST00000503856 GPR101Q96P66 508 aaPredicted RBP25.98■■□□□ 1.75
PDGFRA-203ENST00000503856 GGA1Q9UJY5 639 aa25.98■■□□□ 1.75
PDGFRA-203ENST00000503856 POTECB2RU33 542 aa25.97■■□□□ 1.75
PDGFRA-203ENST00000503856 UFL1O94874 794 aa25.97■■□□□ 1.75
PDGFRA-203ENST00000503856 CCDC57Q2TAC2 916 aa25.97■■□□□ 1.75
PDGFRA-203ENST00000503856 INTS3Q68E01 1043 aaKnown RBP25.97■■□□□ 1.75
PDGFRA-203ENST00000503856 CLUAP1Q96AJ1 413 aa25.97■■□□□ 1.75
PDGFRA-203ENST00000503856 SCN4AP35499 1836 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 VEGFAP15692 232 aaPredicted RBP25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 ZKSCAN2Q63HK3 967 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 ANKRD44Q8N8A2 993 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 ZNF594Q96JF6 807 aaPredicted RBP25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 EYA3Q99504 573 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 ZNRF3Q9ULT6 936 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 A0A1B0GUL6 1792 aa25.96■■□□□ 1.75
PDGFRA-203ENST00000503856 WTIPA6NIX2 430 aaPredicted RBP25.95■■□□□ 1.74
PDGFRA-203ENST00000503856 RABL6Q3YEC7 729 aaPredicted RBP25.95■■□□□ 1.74
PDGFRA-203ENST00000503856 UBTFL1P0CB47 393 aaPredicted RBP25.94■■□□□ 1.74
PDGFRA-203ENST00000503856 ATP2B4P23634 1241 aa25.94■■□□□ 1.74
PDGFRA-203ENST00000503856 C1QTNF8P60827 252 aa25.94■■□□□ 1.74
PDGFRA-203ENST00000503856 TAF7LQ5H9L4 462 aa25.94■■□□□ 1.74
PDGFRA-203ENST00000503856 ZC3H12CQ9C0D7 883 aaKnown RBP25.94■■□□□ 1.74
PDGFRA-203ENST00000503856 GPC2Q8N158 579 aa25.93■■□□□ 1.74
PDGFRA-203ENST00000503856 L3MBTL3Q96JM7 780 aaPredicted RBP25.93■■□□□ 1.74
PDGFRA-203ENST00000503856 GJA3Q9Y6H8 435 aa25.93■■□□□ 1.74
PDGFRA-203ENST00000503856 CHRNDQ07001 517 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 CXCL9Q07325 125 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 DOK7Q18PE1 504 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 C16orf71Q8IYS4 520 aaPredicted RBP25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 MEIS3Q99687 375 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 DBNDD1Q9H9R9 158 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 SCN9AQ15858 1988 aa25.92■■□□□ 1.74
PDGFRA-203ENST00000503856 YDJCA8MPS7 323 aa25.91■■□□□ 1.74
PDGFRA-203ENST00000503856 TOMM70O94826 608 aa25.91■■□□□ 1.74
PDGFRA-203ENST00000503856 LDHAL6AQ6ZMR3 332 aa25.91■■□□□ 1.74
PDGFRA-203ENST00000503856 ANKRD2Q9GZV1 360 aa25.91■■□□□ 1.74
PDGFRA-203ENST00000503856 ECE2O60344 883 aa25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 RAD17O75943 681 aa25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 TMEM57Q8N5G2 664 aa25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 HELBQ8NG08 1087 aaPredicted RBP25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 CNNM1Q9NRU3 951 aa25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 LEMD3Q9Y2U8 911 aa25.89■■□□□ 1.74
PDGFRA-203ENST00000503856 CIAPIN1Q6FI81 312 aa25.88■■□□□ 1.73
PDGFRA-203ENST00000503856 YTHDC1Q96MU7 727 aaKnown RBP25.88■■□□□ 1.73
PDGFRA-203ENST00000503856 PUS3Q9BZE2 481 aaKnown RBP25.88■■□□□ 1.73
PDGFRA-203ENST00000503856 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
PDGFRA-203ENST00000503856 TAF5LO75529 589 aa25.87■■□□□ 1.73
PDGFRA-203ENST00000503856 GNAI3P08754 354 aa25.87■■□□□ 1.73
PDGFRA-203ENST00000503856 HDAC5Q9UQL6 1122 aa25.87■■□□□ 1.73
PDGFRA-203ENST00000503856 ZNF804BA4D1E1 1349 aa25.87■■□□□ 1.73
PDGFRA-203ENST00000503856 PSME4Q14997 1843 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 IQCA1LA6NCM1 817 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 G3V3G9 751 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 DCAF8Q5TAQ9 597 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 DZIP1LQ8IYY4 767 aaKnown RBP25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 RBM46Q8TBY0 533 aaKnown RBP25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 KCNQ5Q9NR82 932 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 HACL1Q9UJ83 578 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 RCAN3Q9UKA8 241 aa25.86■■□□□ 1.73
PDGFRA-203ENST00000503856 MED23Q9ULK4 1368 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 SNAP23O00161 211 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 PLIN1O60240 522 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 RLBP1P12271 317 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 TNIP1Q15025 636 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 TXNRD3Q86VQ6 643 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 FTSJ3Q8IY81 847 aaKnown RBP25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 KLHDC4Q8TBB5 520 aa25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 TAF1DQ9H5J8 278 aaPredicted RBP25.85■■□□□ 1.73
PDGFRA-203ENST00000503856 KCNJ4P48050 445 aa25.84■■□□□ 1.73
PDGFRA-203ENST00000503856 SCNN1DP51172 638 aa25.84■■□□□ 1.73
PDGFRA-203ENST00000503856 RIPOR2Q9Y4F9 1068 aa25.84■■□□□ 1.73
PDGFRA-203ENST00000503856 PSMD14O00487 310 aa25.83■■□□□ 1.73
PDGFRA-203ENST00000503856 KLRK1P26718 216 aa25.83■■□□□ 1.73
PDGFRA-203ENST00000503856 RFX5P48382 616 aaPredicted RBP25.83■■□□□ 1.73
PDGFRA-203ENST00000503856 LRRC24Q50LG9 513 aa25.83■■□□□ 1.73
PDGFRA-203ENST00000503856 EPHX2P34913 555 aa25.82■■□□□ 1.72
PDGFRA-203ENST00000503856 POTEIP0CG38 1075 aa25.81■■□□□ 1.72
PDGFRA-203ENST00000503856 POTEJP0CG39 1038 aa25.81■■□□□ 1.72
PDGFRA-203ENST00000503856 LMOD1P29536 600 aaPredicted RBP25.81■■□□□ 1.72
PDGFRA-203ENST00000503856 EPS15P42566 896 aa25.81■■□□□ 1.72
PDGFRA-203ENST00000503856 GMPSP49915 693 aaPredicted RBP25.81■■□□□ 1.72
PDGFRA-203ENST00000503856 PTPN12Q05209 780 aaKnown RBP25.8■■□□□ 1.72
PDGFRA-203ENST00000503856 ITPRIPQ8IWB1 547 aa25.8■■□□□ 1.72
PDGFRA-203ENST00000503856 ZBTB12Q9Y330 459 aaPredicted RBP25.8■■□□□ 1.72
PDGFRA-203ENST00000503856 EAPPQ56P03 285 aaPredicted RBP25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 PODNQ7Z5L7 613 aa25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 SMC1BQ8NDV3 1235 aa25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 PANK1Q8TE04 598 aa25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 GPRC5DQ9NZD1 345 aa25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 MROH5Q6ZUA9 1318 aa25.79■■□□□ 1.72
PDGFRA-203ENST00000503856 GNAI2P04899 355 aa25.78■■□□□ 1.72
PDGFRA-203ENST00000503856 COA1Q9GZY4 146 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms