RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 VIL1P09327 827 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-210ENST00000503827 GPSM2P81274 684 aa20.82■□□□□ 0.92
PDLIM7-210ENST00000503827 FBXO46Q6PJ61 603 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-210ENST00000503827 TSPYL4Q9UJ04 414 aa20.82■□□□□ 0.92
PDLIM7-210ENST00000503827 G3V3G9 751 aa20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 NFE2L2Q16236 605 aa20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 DCAF8Q5TAQ9 597 aa20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 ANGEL2Q5VTE6 544 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 CELF1Q92879 486 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 ZC3H12CQ9C0D7 883 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-210ENST00000503827 SCARF1Q14162 830 aa20.8■□□□□ 0.92
PDLIM7-210ENST00000503827 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-210ENST00000503827 XAGE3Q8WTP9 111 aa20.8■□□□□ 0.92
PDLIM7-210ENST00000503827 PSME4Q14997 1843 aa20.79■□□□□ 0.92
PDLIM7-210ENST00000503827 GPR25O00155 361 aa20.79■□□□□ 0.92
PDLIM7-210ENST00000503827 HABP4Q5JVS0 413 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-210ENST00000503827 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
PDLIM7-210ENST00000503827 ZNF280AP59817 542 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-210ENST00000503827 SF3B3Q15393 1217 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-210ENST00000503827 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-210ENST00000503827 TM4SF4P48230 202 aa20.77■□□□□ 0.92
PDLIM7-210ENST00000503827 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
PDLIM7-210ENST00000503827 PLEKHF1Q96S99 279 aa20.77■□□□□ 0.92
PDLIM7-210ENST00000503827 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
PDLIM7-210ENST00000503827 UBE2Q2LH0YL09 131 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 MOB2Q70IA6 237 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 ZNF609O15014 1411 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 MAPK8IP3Q9UPT6 1336 aa20.76■□□□□ 0.91
PDLIM7-210ENST00000503827 FKTNO75072 461 aa20.75■□□□□ 0.91
PDLIM7-210ENST00000503827 RSBN1LQ6PCB5 846 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-210ENST00000503827 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
PDLIM7-210ENST00000503827 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-210ENST00000503827 COL4A1P02462 1669 aa20.74■□□□□ 0.91
PDLIM7-210ENST00000503827 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-210ENST00000503827 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
PDLIM7-210ENST00000503827 TTLL12Q14166 644 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-210ENST00000503827 MYOZ2Q9NPC6 264 aa20.74■□□□□ 0.91
PDLIM7-210ENST00000503827 USP17L8P0C7I0 530 aa20.73■□□□□ 0.91
PDLIM7-210ENST00000503827 BABAM1Q9NWV8 329 aa20.73■□□□□ 0.91
PDLIM7-210ENST00000503827 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
PDLIM7-210ENST00000503827 UFL1O94874 794 aa20.72■□□□□ 0.91
PDLIM7-210ENST00000503827 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
PDLIM7-210ENST00000503827 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
PDLIM7-210ENST00000503827 NF2P35240 595 aa20.71■□□□□ 0.91
PDLIM7-210ENST00000503827 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
PDLIM7-210ENST00000503827 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
PDLIM7-210ENST00000503827 SCAF8Q9UPN6 1271 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-210ENST00000503827 MKRN3Q13064 507 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-210ENST00000503827 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
PDLIM7-210ENST00000503827 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-210ENST00000503827 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
PDLIM7-210ENST00000503827 RBBP6Q7Z6E9 1792 aaKnown RBP20.69■□□□□ 0.9
PDLIM7-210ENST00000503827 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
PDLIM7-210ENST00000503827 PRAMEF18Q5VWM3 479 aa20.69■□□□□ 0.9
PDLIM7-210ENST00000503827 ANKRD13DQ6ZTN6 518 aa20.69■□□□□ 0.9
PDLIM7-210ENST00000503827 GMLQ99445 158 aa20.69■□□□□ 0.9
PDLIM7-210ENST00000503827 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
PDLIM7-210ENST00000503827 USP17L3A6NCW0 530 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 USP17L4A6NCW7 530 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 RIPK4P57078 832 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 USP17L1Q7RTZ2 530 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 CHPF2Q9P2E5 772 aa20.67■□□□□ 0.9
PDLIM7-210ENST00000503827 POTEFA5A3E0 1075 aa20.66■□□□□ 0.9
PDLIM7-210ENST00000503827 NBPF9Q3BBW0 867 aa20.66■□□□□ 0.9
PDLIM7-210ENST00000503827 ARMC9Q7Z3E5 817 aa20.66■□□□□ 0.9
PDLIM7-210ENST00000503827 R3HDMLQ9H3Y0 253 aa20.66■□□□□ 0.9
PDLIM7-210ENST00000503827 TRIM17Q9Y577 477 aa20.66■□□□□ 0.9
PDLIM7-210ENST00000503827 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-210ENST00000503827 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
PDLIM7-210ENST00000503827 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
PDLIM7-210ENST00000503827 FXR1P51114 621 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM7-210ENST00000503827 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
PDLIM7-210ENST00000503827 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
PDLIM7-210ENST00000503827 XDHP47989 1333 aa20.63■□□□□ 0.89
PDLIM7-210ENST00000503827 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-210ENST00000503827 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-210ENST00000503827 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
PDLIM7-210ENST00000503827 ATP2B4P23634 1241 aa20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 INHBEP58166 350 aa20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 PRKG1Q13976 671 aa20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 SPRYD7Q5W111 196 aa20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 DBF4Q9UBU7 674 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-210ENST00000503827 MANSC4A6NHS7 340 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-210ENST00000503827 WNT10BO00744 389 aa20.61■□□□□ 0.89
PDLIM7-210ENST00000503827 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
PDLIM7-210ENST00000503827 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
PDLIM7-210ENST00000503827 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-210ENST00000503827 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-210ENST00000503827 KIAA0100Q14667 2235 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 LAMB1P07942 1786 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 MYO3BQ8WXR4 1341 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 LDLRAD1Q5T700 205 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 IFNL1Q8IU54 200 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 ERO1AQ96HE7 468 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms