RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 CHL1O00533 1208 aa16.96■□□□□ 0.31
TRIO-205ENST00000503399 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.31
TRIO-205ENST00000503399 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
TRIO-205ENST00000503399 CCDC102AQ96A19 550 aa16.96■□□□□ 0.31
TRIO-205ENST00000503399 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
TRIO-205ENST00000503399 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
TRIO-205ENST00000503399 IRS4O14654 1257 aaPredicted RBP16.95■□□□□ 0.3
TRIO-205ENST00000503399 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
TRIO-205ENST00000503399 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
TRIO-205ENST00000503399 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
TRIO-205ENST00000503399 TRPA1O75762 1119 aa16.94■□□□□ 0.3
TRIO-205ENST00000503399 UFL1O94874 794 aa16.94■□□□□ 0.3
TRIO-205ENST00000503399 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
TRIO-205ENST00000503399 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
TRIO-205ENST00000503399 SAGE1Q9NXZ1 904 aa16.94■□□□□ 0.3
TRIO-205ENST00000503399 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
TRIO-205ENST00000503399 ASTN2O75129 1339 aaPredicted RBP16.94■□□□□ 0.3
TRIO-205ENST00000503399 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
TRIO-205ENST00000503399 SOX10P56693 466 aa16.93■□□□□ 0.3
TRIO-205ENST00000503399 RALBP1Q15311 655 aa16.93■□□□□ 0.3
TRIO-205ENST00000503399 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
TRIO-205ENST00000503399 AKAP11Q9UKA4 1901 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 SLC10A3P09131 477 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 HOXB7P09629 217 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
TRIO-205ENST00000503399 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
TRIO-205ENST00000503399 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
TRIO-205ENST00000503399 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIO-205ENST00000503399 ANGEL2Q5VTE6 544 aaKnown RBP16.91■□□□□ 0.3
TRIO-205ENST00000503399 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
TRIO-205ENST00000503399 GGA1Q9UJY5 639 aa16.91■□□□□ 0.3
TRIO-205ENST00000503399 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
TRIO-205ENST00000503399 CCDC85AQ96PX6 553 aaPredicted RBP16.9■□□□□ 0.3
TRIO-205ENST00000503399 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
TRIO-205ENST00000503399 SCARF1Q14162 830 aa16.89■□□□□ 0.29
TRIO-205ENST00000503399 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
TRIO-205ENST00000503399 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
TRIO-205ENST00000503399 MYD88Q99836 296 aa16.89■□□□□ 0.29
TRIO-205ENST00000503399 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
TRIO-205ENST00000503399 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
TRIO-205ENST00000503399 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
TRIO-205ENST00000503399 CCDC152Q4G0S7 254 aa16.88■□□□□ 0.29
TRIO-205ENST00000503399 RSBN1LQ6PCB5 846 aaPredicted RBP16.88■□□□□ 0.29
TRIO-205ENST00000503399 RASAL3Q86YV0 1011 aa16.88■□□□□ 0.29
TRIO-205ENST00000503399 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
TRIO-205ENST00000503399 CTU1Q7Z7A3 348 aaKnown RBP16.87■□□□□ 0.29
TRIO-205ENST00000503399 AGBL3Q8NEM8 1001 aa16.87■□□□□ 0.29
TRIO-205ENST00000503399 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
TRIO-205ENST00000503399 PHAXQ9H814 394 aaKnown RBP16.87■□□□□ 0.29
TRIO-205ENST00000503399 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
TRIO-205ENST00000503399 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
TRIO-205ENST00000503399 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
TRIO-205ENST00000503399 ZNF280AP59817 542 aaPredicted RBP16.86■□□□□ 0.29
TRIO-205ENST00000503399 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
TRIO-205ENST00000503399 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
TRIO-205ENST00000503399 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
TRIO-205ENST00000503399 PDE8AO60658 829 aa16.85■□□□□ 0.29
TRIO-205ENST00000503399 USP17L8P0C7I0 530 aa16.85■□□□□ 0.29
TRIO-205ENST00000503399 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
TRIO-205ENST00000503399 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
TRIO-205ENST00000503399 XDHP47989 1333 aa16.85■□□□□ 0.29
TRIO-205ENST00000503399 PSME4Q14997 1843 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 PCCAP05165 728 aaPredicted RBP16.84■□□□□ 0.29
TRIO-205ENST00000503399 FKBP1BP68106 108 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
TRIO-205ENST00000503399 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
TRIO-205ENST00000503399 FBXW7Q969H0 707 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 CWC25Q9NXE8 425 aaPredicted RBP16.84■□□□□ 0.29
TRIO-205ENST00000503399 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 ZNF609O15014 1411 aa16.84■□□□□ 0.29
TRIO-205ENST00000503399 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
TRIO-205ENST00000503399 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
TRIO-205ENST00000503399 CCDC191Q8NCU4 936 aa16.83■□□□□ 0.28
TRIO-205ENST00000503399 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
TRIO-205ENST00000503399 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
TRIO-205ENST00000503399 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
TRIO-205ENST00000503399 GMLQ99445 158 aa16.82■□□□□ 0.28
TRIO-205ENST00000503399 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
TRIO-205ENST00000503399 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
TRIO-205ENST00000503399 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
TRIO-205ENST00000503399 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
TRIO-205ENST00000503399 CDC5LQ99459 802 aaKnown RBP16.81■□□□□ 0.28
TRIO-205ENST00000503399 PCDH10Q9P2E7 1040 aa16.81■□□□□ 0.28
TRIO-205ENST00000503399 HPS5Q9UPZ3 1129 aa16.81■□□□□ 0.28
TRIO-205ENST00000503399 SPEF2Q9C093 1822 aa16.81■□□□□ 0.28
TRIO-205ENST00000503399 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
TRIO-205ENST00000503399 DDX58O95786 925 aaKnown RBP16.8■□□□□ 0.28
TRIO-205ENST00000503399 CTSWP56202 376 aa16.8■□□□□ 0.28
TRIO-205ENST00000503399 NBPF9Q3BBW0 867 aa16.8■□□□□ 0.28
TRIO-205ENST00000503399 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
TRIO-205ENST00000503399 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
TRIO-205ENST00000503399 NF2P35240 595 aa16.79■□□□□ 0.28
TRIO-205ENST00000503399 GNAI1P63096 354 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms