RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 DCAF8Q5TAQ9 597 aa23.64■■□□□ 1.37
HERC6-204ENST00000502870 XAGE3Q8WTP9 111 aa23.64■■□□□ 1.37
HERC6-204ENST00000502870 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
HERC6-204ENST00000502870 POLLQ9UGP5 575 aa23.64■■□□□ 1.37
HERC6-204ENST00000502870 SCN9AQ15858 1988 aa23.63■■□□□ 1.37
HERC6-204ENST00000502870 VIL1P09327 827 aaKnown RBP23.63■■□□□ 1.37
HERC6-204ENST00000502870 SF3B3Q15393 1217 aaKnown RBP23.63■■□□□ 1.37
HERC6-204ENST00000502870 PLEKHF1Q96S99 279 aa23.63■■□□□ 1.37
HERC6-204ENST00000502870 ZC3H12CQ9C0D7 883 aaKnown RBP23.63■■□□□ 1.37
HERC6-204ENST00000502870 GPSM2P81274 684 aa23.62■■□□□ 1.37
HERC6-204ENST00000502870 ZNF296Q8WUU4 475 aaPredicted RBP23.62■■□□□ 1.37
HERC6-204ENST00000502870 CELF1Q92879 486 aaKnown RBP23.62■■□□□ 1.37
HERC6-204ENST00000502870 ZNF609O15014 1411 aa23.61■■□□□ 1.37
HERC6-204ENST00000502870 NOM1Q5C9Z4 860 aaKnown RBP23.61■■□□□ 1.37
HERC6-204ENST00000502870 ANGEL2Q5VTE6 544 aaKnown RBP23.61■■□□□ 1.37
HERC6-204ENST00000502870 TBC1D16Q8TBP0 767 aa23.61■■□□□ 1.37
HERC6-204ENST00000502870 KCNQ5Q9NR82 932 aa23.61■■□□□ 1.37
HERC6-204ENST00000502870 PSME4Q14997 1843 aa23.61■■□□□ 1.37
HERC6-204ENST00000502870 PITPNM2Q9BZ72 1349 aa23.6■■□□□ 1.37
HERC6-204ENST00000502870 SCARF1Q14162 830 aa23.6■■□□□ 1.37
HERC6-204ENST00000502870 FBXO46Q6PJ61 603 aaPredicted RBP23.6■■□□□ 1.37
HERC6-204ENST00000502870 AGBL3Q8NEM8 1001 aa23.6■■□□□ 1.37
HERC6-204ENST00000502870 NECTIN2Q92692 538 aa23.6■■□□□ 1.37
HERC6-204ENST00000502870 ZNF280AP59817 542 aaPredicted RBP23.59■■□□□ 1.37
HERC6-204ENST00000502870 ASTN2O75129 1339 aaPredicted RBP23.59■■□□□ 1.37
HERC6-204ENST00000502870 TBC1D8O95759 1140 aa23.58■■□□□ 1.37
HERC6-204ENST00000502870 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
HERC6-204ENST00000502870 PODXL2Q9NZ53 605 aa23.57■■□□□ 1.36
HERC6-204ENST00000502870 GPR25O00155 361 aa23.56■■□□□ 1.36
HERC6-204ENST00000502870 LMOD3Q0VAK6 560 aa23.56■■□□□ 1.36
HERC6-204ENST00000502870 RSBN1LQ6PCB5 846 aaPredicted RBP23.56■■□□□ 1.36
HERC6-204ENST00000502870 PLBD2Q8NHP8 589 aa23.56■■□□□ 1.36
HERC6-204ENST00000502870 FAM89AQ96GI7 184 aa23.56■■□□□ 1.36
HERC6-204ENST00000502870 ANKIB1Q9P2G1 1089 aa23.56■■□□□ 1.36
HERC6-204ENST00000502870 UFL1O94874 794 aa23.55■■□□□ 1.36
HERC6-204ENST00000502870 USP17L8P0C7I0 530 aa23.55■■□□□ 1.36
HERC6-204ENST00000502870 HSP90B1P14625 803 aaKnown RBP23.55■■□□□ 1.36
HERC6-204ENST00000502870 SREBF2Q12772 1141 aa23.55■■□□□ 1.36
HERC6-204ENST00000502870 MYOZ2Q9NPC6 264 aa23.55■■□□□ 1.36
HERC6-204ENST00000502870 NF2P35240 595 aa23.54■■□□□ 1.36
HERC6-204ENST00000502870 TM4SF4P48230 202 aa23.54■■□□□ 1.36
HERC6-204ENST00000502870 TTLL12Q14166 644 aaPredicted RBP23.54■■□□□ 1.36
HERC6-204ENST00000502870 GGA1Q9UJY5 639 aa23.54■■□□□ 1.36
HERC6-204ENST00000502870 FKTNO75072 461 aa23.53■■□□□ 1.36
HERC6-204ENST00000502870 RIPK4P57078 832 aa23.53■■□□□ 1.36
HERC6-204ENST00000502870 ANKRD13DQ6ZTN6 518 aa23.53■■□□□ 1.36
HERC6-204ENST00000502870 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
HERC6-204ENST00000502870 ISCA1Q9BUE6 129 aa23.53■■□□□ 1.36
HERC6-204ENST00000502870 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
HERC6-204ENST00000502870 UBE2Q2LH0YL09 131 aa23.51■■□□□ 1.35
HERC6-204ENST00000502870 CFHR5Q9BXR6 569 aa23.51■■□□□ 1.35
HERC6-204ENST00000502870 COL4A1P02462 1669 aa23.51■■□□□ 1.35
HERC6-204ENST00000502870 ATP5J2-PTCD1G3V325 749 aa23.5■■□□□ 1.35
HERC6-204ENST00000502870 HABP4Q5JVS0 413 aaKnown RBP23.5■■□□□ 1.35
HERC6-204ENST00000502870 MOB2Q70IA6 237 aa23.5■■□□□ 1.35
HERC6-204ENST00000502870 CHPF2Q9P2E5 772 aa23.5■■□□□ 1.35
HERC6-204ENST00000502870 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
HERC6-204ENST00000502870 INTS3Q68E01 1043 aaKnown RBP23.49■■□□□ 1.35
HERC6-204ENST00000502870 DBF4Q9UBU7 674 aaPredicted RBP23.49■■□□□ 1.35
HERC6-204ENST00000502870 USP17L3A6NCW0 530 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 USP17L4A6NCW7 530 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 ALDH1A1P00352 501 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 HDGFL1Q5TGJ6 251 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 USP17L1Q7RTZ2 530 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 GMLQ99445 158 aa23.48■■□□□ 1.35
HERC6-204ENST00000502870 TRIM28Q13263 835 aaKnown RBP23.47■■□□□ 1.35
HERC6-204ENST00000502870 OGFOD1Q8N543 542 aa23.47■■□□□ 1.35
HERC6-204ENST00000502870 HOXB7P09629 217 aa23.46■■□□□ 1.35
HERC6-204ENST00000502870 XDHP47989 1333 aa23.46■■□□□ 1.35
HERC6-204ENST00000502870 CCDC152Q4G0S7 254 aa23.46■■□□□ 1.35
HERC6-204ENST00000502870 ARMC9Q7Z3E5 817 aa23.46■■□□□ 1.35
HERC6-204ENST00000502870 RBBP6Q7Z6E9 1792 aaKnown RBP23.46■■□□□ 1.35
HERC6-204ENST00000502870 MKRN3Q13064 507 aaKnown RBP23.45■■□□□ 1.34
HERC6-204ENST00000502870 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
HERC6-204ENST00000502870 KIAA0100Q14667 2235 aaKnown RBP23.44■■□□□ 1.34
HERC6-204ENST00000502870 MYO3BQ8WXR4 1341 aa23.44■■□□□ 1.34
HERC6-204ENST00000502870 MMP14P50281 582 aa23.44■■□□□ 1.34
HERC6-204ENST00000502870 ZBTB38Q8NAP3 1195 aaPredicted RBP23.44■■□□□ 1.34
HERC6-204ENST00000502870 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
HERC6-204ENST00000502870 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
HERC6-204ENST00000502870 NBPF9Q3BBW0 867 aa23.43■■□□□ 1.34
HERC6-204ENST00000502870 PRAMEF18Q5VWM3 479 aa23.43■■□□□ 1.34
HERC6-204ENST00000502870 CHL1O00533 1208 aa23.42■■□□□ 1.34
HERC6-204ENST00000502870 TMPOP42166 694 aaKnown RBP23.42■■□□□ 1.34
HERC6-204ENST00000502870 SCAF8Q9UPN6 1271 aaKnown RBP23.42■■□□□ 1.34
HERC6-204ENST00000502870 INHBEP58166 350 aa23.41■■□□□ 1.34
HERC6-204ENST00000502870 KRT24Q2M2I5 525 aa23.41■■□□□ 1.34
HERC6-204ENST00000502870 ANKRD18AQ8IVF6 992 aa23.41■■□□□ 1.34
HERC6-204ENST00000502870 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
HERC6-204ENST00000502870 PTPN12Q05209 780 aaKnown RBP23.4■■□□□ 1.34
HERC6-204ENST00000502870 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
HERC6-204ENST00000502870 RIC3Q7Z5B4 369 aa23.4■■□□□ 1.34
HERC6-204ENST00000502870 APOBEC3FQ8IUX4 373 aaKnown RBP23.4■■□□□ 1.34
HERC6-204ENST00000502870 MED23Q9ULK4 1368 aa23.4■■□□□ 1.34
HERC6-204ENST00000502870 MANSC4A6NHS7 340 aaPredicted RBP23.39■■□□□ 1.33
HERC6-204ENST00000502870 WNT10BO00744 389 aa23.39■■□□□ 1.33
HERC6-204ENST00000502870 SPRYD7Q5W111 196 aa23.39■■□□□ 1.33
HERC6-204ENST00000502870 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
HERC6-204ENST00000502870 PDE8AO60658 829 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms