RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 CLEC4GQ6UXB4 293 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 ESYT1Q9BSJ8 1104 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 USP26Q9BXU7 913 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 TTC41PQ6P2S7 1318 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 A0A1B0GUL7 405 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 ANKRD18BA2A2Z9 1011 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 ZPR1O75312 459 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 GLRX3O76003 335 aaKnown RBP8.92□□□□□ -0.98
CPNE4-202ENST00000502818 CIAO1O76071 339 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 LDHAL6AQ6ZMR3 332 aa8.92□□□□□ -0.98
CPNE4-202ENST00000502818 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-202ENST00000502818 ZNF609O15014 1411 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 TAF5LO75529 589 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 CD2BP2O95400 341 aaKnown RBP8.91□□□□□ -0.98
CPNE4-202ENST00000502818 RFC4P35249 363 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
CPNE4-202ENST00000502818 SCARF1Q14162 830 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 NFIXQ14938 502 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 VGLL2Q8N8G2 317 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 ZNF652Q9Y2D9 606 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 DDX60Q8IY21 1712 aaKnown RBP8.91□□□□□ -0.98
CPNE4-202ENST00000502818 SCN7AQ01118 1682 aa8.91□□□□□ -0.98
CPNE4-202ENST00000502818 GYS1P13807 737 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 PI16Q6UXB8 463 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 FAM227BQ96M60 508 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 DNAJC2Q99543 621 aaKnown RBP8.9□□□□□ -0.98
CPNE4-202ENST00000502818 UPF2Q9HAU5 1272 aaKnown RBP8.9□□□□□ -0.98
CPNE4-202ENST00000502818 CEP126Q9P2H0 1117 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 C4AP0C0L4 1744 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 TAF1P21675 1872 aa8.9□□□□□ -0.98
CPNE4-202ENST00000502818 METTL24Q5JXM2 366 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 SLC27A3Q5K4L6 730 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 CWC27Q6UX04 472 aaKnown RBP8.9□□□□□ -0.99
CPNE4-202ENST00000502818 NBPF5PQ86XG9 351 aaPredicted RBP8.9□□□□□ -0.99
CPNE4-202ENST00000502818 XAGE2Q96GT9 111 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 SETDB2Q96T68 719 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 SNRKQ9NRH2 765 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 PALD1Q9ULE6 856 aa8.9□□□□□ -0.99
CPNE4-202ENST00000502818 ERC2O15083 957 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 ATP5JP18859 108 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
CPNE4-202ENST00000502818 CNTROBQ8N137 903 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 CELF1Q92879 486 aaKnown RBP8.89□□□□□ -0.99
CPNE4-202ENST00000502818 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 DDR1Q08345 913 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 COL23A1Q86Y22 540 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-202ENST00000502818 GPATCH3Q96I76 525 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
CPNE4-202ENST00000502818 UBR3Q6ZT12 1888 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 A0A0D9SFI3 127 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 SGSM2O43147 1006 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 GTF2E1P29083 439 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 TM4SF1P30408 202 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 PTH1RQ03431 593 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 EN1Q05925 392 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 NMIQ13287 307 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 EZH2Q15910 746 aaKnown RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 SEC62Q99442 399 aaKnown RBP8.88□□□□□ -0.99
CPNE4-202ENST00000502818 ANO2Q9NQ90 1003 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 MYH3P11055 1940 aa8.88□□□□□ -0.99
CPNE4-202ENST00000502818 GOLIM4O00461 696 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 PLSCR1O15162 318 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 ATP2B3Q16720 1220 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 SLC10A5Q5PT55 438 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 ZNF589Q86UQ0 364 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-202ENST00000502818 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 EVI5LQ96CN4 794 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 HAUS7Q99871 368 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 LSG1Q9H089 658 aaKnown RBP8.87□□□□□ -0.99
CPNE4-202ENST00000502818 LRP5O75197 1615 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 PDE8BO95263 885 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 FGFR2P21802 821 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 PHKA1P46020 1223 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 SF3B3Q15393 1217 aaKnown RBP8.87□□□□□ -0.99
CPNE4-202ENST00000502818 PRR5LQ6MZQ0 368 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 CASC1Q6TDU7 716 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 FSD1Q9BTV5 496 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 TFCP2L1Q9NZI6 479 aa8.87□□□□□ -0.99
CPNE4-202ENST00000502818 TNRC6CQ9HCJ0 1690 aaKnown RBP8.86□□□□□ -0.99
CPNE4-202ENST00000502818 KLRK1P26718 216 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 SSFA2P28290 1259 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 ZAP70P43403 619 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 CHRNDQ07001 517 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 MSL1Q68DK7 614 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-202ENST00000502818 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 SPEF2Q9C093 1822 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 IFIT1P09914 478 aaKnown RBP8.86□□□□□ -0.99
CPNE4-202ENST00000502818 MCAMP43121 646 aa8.86□□□□□ -0.99
CPNE4-202ENST00000502818 FKBP4Q02790 459 aaKnown RBP eCLIP8.86□□□□□ -0.99
CPNE4-202ENST00000502818 GSE1Q14687 1217 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms