RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 KIAA2012Q0VF49 1180 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 BICC1Q9H694 974 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 FZD9O00144 591 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 EYA3Q99504 573 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
UBE2D3-212ENST00000502563 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 MEIS3Q99687 375 aa13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
UBE2D3-212ENST00000502563 GLTPD2A6NH11 291 aa13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 RLBP1P12271 317 aa13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 MED23Q9ULK4 1368 aa13.43□□□□□ -0.26
UBE2D3-212ENST00000502563 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 ZNF609O15014 1411 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 ZBTB22O15209 634 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 GNAI2P04899 355 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 GPSM2P81274 684 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 DDX19BQ9UMR2 479 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
UBE2D3-212ENST00000502563 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 CIAO1O76071 339 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 MVPQ14764 893 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 RIPOR2Q9Y4F9 1068 aa13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-212ENST00000502563 PPIP5K2O43314 1243 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 CHRNDQ07001 517 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 LARGE2Q8N3Y3 721 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 CHMP3Q9Y3E7 222 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 COL4A5P29400 1685 aa13.4□□□□□ -0.26
UBE2D3-212ENST00000502563 UFL1O94874 794 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 NIM1KQ8IY84 436 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 GPC2Q8N158 579 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 ZNRF3Q9ULT6 936 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
UBE2D3-212ENST00000502563 EYA2O00167 538 aa13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 AOC3Q16853 763 aa13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 VGLL2Q8N8G2 317 aa13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
UBE2D3-212ENST00000502563 SCN4AP35499 1836 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 C6orf229H3BNL8 230 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 MMP14P50281 582 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 AAMPQ13685 434 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 COA1Q9GZY4 146 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
UBE2D3-212ENST00000502563 PSME4Q14997 1843 aa13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 PDE8BO95263 885 aa13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 RPAP2Q8IXW5 612 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-212ENST00000502563 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-212ENST00000502563 TNIP1Q15025 636 aa13.35□□□□□ -0.27
UBE2D3-212ENST00000502563 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
UBE2D3-212ENST00000502563 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 309.8 ms